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» Performance Analysis of Sequence Alignment Applications
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3DPVT
2006
IEEE
169views Visualization» more  3DPVT 2006»
14 years 27 days ago
Qualitative Characterization of Deforming Surfaces
This paper extends the idea of classification schemes for static surface curvature into the temporal domain. We seek to identify regions in sequences of depth data that exhibit va...
T. C. Lukins, R. B. Fisher
TPDS
1998
112views more  TPDS 1998»
13 years 8 months ago
Parallel Computation in Biological Sequence Analysis
—A massive volume of biological sequence data is available in over 36 different databases worldwide, including the sequence data generated by the Human Genome project. These data...
Tieng K. Yap, Ophir Frieder, Robert L. Martino
HPCC
2009
Springer
14 years 1 months ago
Load Scheduling Strategies for Parallel DNA Sequencing Applications
This paper studies a load scheduling strategy with nearoptimal processing time leveraging the computational characteristics of parallel DNA sequence alignment algorithms, specific...
Sudha Gunturu, Xiaolin Li, Laurence Tianruo Yang
APBC
2004
13 years 10 months ago
EMAGEN: An Efficient Approach to Multiple Whole Genome Alignment
Following advances in biotechnology, many new whole genome sequences are becoming available every year. A lot of useful information can be derived from the alignment and compariso...
Jitender S. Deogun, Jingyi Yang, Fangrui Ma
NAR
2006
107views more  NAR 2006»
13 years 9 months ago
CorGen - measuring and generating long-range correlations for DNA sequence analysis
CorGen is a web server that measures long-range correlations in the base composition of DNA and generates random sequences with the same correlation parameters. Long-range correla...
Philipp W. Messer, Peter F. Arndt