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» Predicting Time Series with Support Vector Machines
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164
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BMCBI
2010
190views more  BMCBI 2010»
15 years 3 months ago
APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility
Background: It is well known that most of the binding free energy of protein interaction is contributed by a few key hot spot residues. These residues are crucial for understandin...
Jun-Feng Xia, Xing-Ming Zhao, Jiangning Song, De-S...
168
Voted
CSB
2004
IEEE
135views Bioinformatics» more  CSB 2004»
15 years 7 months ago
Selection of Patient Samples and Genes for Outcome Prediction
Gene expression profiles with clinical outcome data enable monitoring of disease progression and prediction of patient survival at the molecular level. We present a new computatio...
Huiqing Liu, Jinyan Li, Limsoon Wong
131
Voted
NAR
2011
182views Computer Vision» more  NAR 2011»
14 years 6 months ago
PAIR: the predicted Arabidopsis interactome resource
The predicted Arabidopsis interactome resource (PAIR, http://www.cls.zju.edu.cn/pair/), comprised of 5990 experimentally reported molecular interactions in Arabidopsis thaliana to...
Mingzhi Lin, Xueling Shen, Xin Chen
146
Voted
RECOMB
2004
Springer
16 years 3 months ago
A class of edit kernels for SVMs to predict translation initiation sites in eukaryotic mRNAs
The prediction of translation initiation sites (TISs) in eukaryotic mRNAs has been a challenging problem in computational molecular biology. In this paper, we present a new algori...
Haifeng Li, Tao Jiang
PPOPP
1993
ACM
15 years 7 months ago
Experience with Fine-Grain Synchronization in MIMD Machines for Preconditioned Conjugate Gradient
This paper discusses our experience with fine-grain synchronization for a variant of the preconditioned conjugate gradient method. This algorithm represents a large class of algo...
Donald Yeung, Anant Agarwal