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KDD
2002
ACM
154views Data Mining» more  KDD 2002»
14 years 8 months ago
Mining Protein Contact Maps
The 3D conformation of a protein may be compactly represented in a symmetrical, square, boolean matrix of pairwise, inter-residue contacts, or "contact map". The contact...
Jingjing Hu, Xiaolan Shen, Yu Shao, Chris Bystroff...
BMCBI
2005
142views more  BMCBI 2005»
13 years 7 months ago
High performance workflow implementation for protein surface characterization using grid technology
Background: This study concerns the development of a high performance workflow that, using grid technology, correlates different kinds of Bioinformatics data, starting from the ba...
Ivan Merelli, Giulia Morra, Daniele D'Agostino, An...
JBCB
2010
123views more  JBCB 2010»
13 years 6 months ago
Characterizing the Space of interatomic Distance Distribution Functions Consistent with Solution Scattering Data
: Scattering of neutrons and x-rays from molecules in solution offers alternative approaches to the studying of a wide range of macromolecular structures in their solution state w...
Paritosh A. Kavathekar, Bruce A. Craig, Alan M. Fr...
NAR
2011
162views Computer Vision» more  NAR 2011»
12 years 10 months ago
GlycomeDB - a unified database for carbohydrate structures
GlycomeDB integrates the structural and taxonomic data of all major public carbohydrate databases, as well as carbohydrates contained in the Protein Data Bank, which renders the d...
René Ranzinger, Stephan Herget, Claus-Wilhe...
SODA
2004
ACM
124views Algorithms» more  SODA 2004»
13 years 9 months ago
Family trees: an ordered dictionary with optimal congestion, locality, degree, and search time
We consider the problem of storing an ordered dictionary data structure over a distributed set of nodes. In contrast to traditional sequential data structures, distributed data st...
Kevin C. Zatloukal, Nicholas J. A. Harvey