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NAR
2007
99views more  NAR 2007»
13 years 9 months ago
PATRIC: The VBI PathoSystems Resource Integration Center
The PathoSystems Resource Integration Center (PATRIC) is one of eight Bioinformatics Resource Centers (BRCs) funded by the National Institute of Allergy and Infection Diseases (NI...
E. E. Snyder, N. Kampanya, J. Lu, Eric K. Nordberg...
IPPS
2010
IEEE
13 years 7 months ago
Scalable failure recovery for high-performance data aggregation
Many high-performance tools, applications and infrastructures, such as Paradyn, STAT, TAU, Ganglia, SuperMon, Astrolabe, Borealis, and MRNet, use data aggregation to synthesize lar...
Dorian C. Arnold, Barton P. Miller
BMCBI
2011
13 years 4 months ago
A lightweight, flow-based toolkit for parallel and distributed bioinformatics pipelines
Background: Bioinformatic analyses typically proceed as chains of data-processing tasks. A pipeline, or ‘workflow’, is a well-defined protocol, with a specific structure defin...
Marcin Cieslik, Cameron Mura
JODI
2010
115views more  JODI 2010»
13 years 4 months ago
ICE-Theorem - End to end semantically aware eResearch infrastructure for theses
: ICE-TheOREM was a project which made several important contributions to the repository domain, promoting deposit by integrating the repository with authoring workflows and enhanc...
Peter Sefton, Jim Downing
NAR
2010
122views more  NAR 2010»
13 years 4 months ago
ELM: the status of the 2010 eukaryotic linear motif resource
Linear motifs are short segments of multidomain proteins that provide regulatory functions independently of protein tertiary structure. Much of intracellular signalling passes thr...
Cathryn M. Gould, Francesca Diella, Allegra Via, P...