49 search results - page 7 / 10 » Reconfigurable Computing for Accelerating Protein Folding Si... |
IPPS
2007
IEEE
14 years 2 months ago
2007
IEEE
1 Profile Hidden Markov Models (profile HMMs) are used as a popular bioinformatics tool for sensitive database searching, e.g. a set of not annotated protein sequences is compared...
BMCBI
2008
13 years 8 months ago
2008
Background: We present a novel method of protein fold decoy discrimination using machine learning, more specifically using neural networks. Here, decoy discrimination is represent...
FPGA
2003
ACM
14 years 1 months ago
2003
ACM
To truly exploit FPGAs for rapid turn-around development and prototyping, placement times must be reduced to seconds; latebound, reconfigurable computing applications may demand p...
RECOMB
2007
Springer
14 years 8 months ago
2007
Springer
We present a technique for approximating the free energy of protein structures using Generalized Belief Propagation (GBP). The accuracy and utility of these estimates are then demo...
MASCOTS
2004
13 years 9 months ago
2004
This paper describes the design and implementation of our high speed simulator for out-of-order microprocessors named BurstScalar. The simulator is based on the wellknown SimpleSc...