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» Reconstructing Phylogenetic Networks Using Maximum Parsimony
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BIOINFORMATICS
2011
13 years 2 months ago
Integrative network alignment reveals large regions of global network similarity in yeast and human
Motivation: High-throughput methods for detecting molecular interactions have produced large sets of biological network data with much more yet to come. Analogous to sequence alig...
Oleksii Kuchaiev, Natasa Przulj
BMCBI
2007
172views more  BMCBI 2007»
13 years 7 months ago
Bayesian approaches to reverse engineer cellular systems: a simulation study on nonlinear Gaussian networks
Background: Reverse engineering cellular networks is currently one of the most challenging problems in systems biology. Dynamic Bayesian networks (DBNs) seem to be particularly su...
Fulvia Ferrazzi, Paola Sebastiani, Marco Ramoni, R...
CSB
2003
IEEE
152views Bioinformatics» more  CSB 2003»
14 years 1 months ago
A Parallel Genetic Algorithm for Physical Mapping of Chromosomes
Physical map reconstruction in the presence of errors is a central problem in genetics of high computational complexity. A parallel genetic algorithm for a maximum likelihood esti...
Suchendra M. Bhandarkar, Jinling Huang, Jonathan A...
TMC
2010
108views more  TMC 2010»
13 years 6 months ago
Radio Tomographic Imaging with Wireless Networks
—Radio Tomographic Imaging (RTI) is an emerging technology for imaging passive objects (objects that do not carry a transmitting device) with wireless networks. This paper presen...
Joey Wilson, Neal Patwari
BMCBI
2006
104views more  BMCBI 2006»
13 years 7 months ago
MANET: tracing evolution of protein architecture in metabolic networks
Background: Cellular metabolism can be characterized by networks of enzymatic reactions and transport processes capable of supporting cellular life. Our aim is to find evolutionar...
Hee Shin Kim, Jay E. Mittenthal, Gustavo Caetano-A...