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» Recursion in reconfigurable computing: A survey of implement...
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GLVLSI
2009
IEEE
146views VLSI» more  GLVLSI 2009»
13 years 11 months ago
A reconfigurable stochastic architecture for highly reliable computing
Mounting concerns over variability, defects and noise motivate a new approach for integrated circuits: the design of stochastic logic, that is to say, digital circuitry that opera...
Xin Li, Weikang Qian, Marc D. Riedel, Kia Bazargan...
ARC
2007
Springer
140views Hardware» more  ARC 2007»
13 years 11 months ago
Reconfigurable Computing for Accelerating Protein Folding Simulations
Abstract. This paper presents a methodology for the design of a reconfigurable computing system applied to a complex problem in molecular Biology: the protein folding problem. An e...
Nilton B. Armstrong, Heitor S. Lopes, Carlos R. Er...
DATE
2009
IEEE
159views Hardware» more  DATE 2009»
14 years 2 months ago
Design and implementation of a database filter for BLAST acceleration
— BLAST is a very popular Computational Biology algorithm. Since it is computationally expensive it is a natural target for acceleration research, and many reconfigurable archite...
Panagiotis Afratis, Constantinos Galanakis, Euripi...
IPPS
2010
IEEE
13 years 5 months ago
Fast Smith-Waterman hardware implementation
The Smith-Waterman (SW) algorithm is one of the widely used algorithms for sequence alignment in computational biology. With the growing size of the sequence database, there is alw...
Zubair Nawaz, Koen Bertels, Huseyin Ekin Sumbul
23
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BIRTHDAY
2010
Springer
13 years 7 months ago
Programming Inductive Proofs - A New Approach Based on Contextual Types
In this paper, we present an overview to programming with proofs in the reasoning framework, Beluga. Beluga supports the specification of formal systems given by axioms and inferen...
Brigitte Pientka