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SASP
2009
IEEE
291views Hardware» more  SASP 2009»
14 years 4 months ago
A parameterisable and scalable Smith-Waterman algorithm implementation on CUDA-compatible GPUs
—This paper describes a multi-threaded parallel design and implementation of the Smith-Waterman (SM) algorithm on compute unified device architecture (CUDA)-compatible graphic pr...
Cheng Ling, Khaled Benkrid, Tsuyoshi Hamada
AUSDM
2008
Springer
238views Data Mining» more  AUSDM 2008»
13 years 11 months ago
Graphics Hardware based Efficient and Scalable Fuzzy C-Means Clustering
The exceptional growth of graphics hardware in programmability and data processing speed in the past few years has fuelled extensive research in using it for general purpose compu...
S. A. Arul Shalom, Manoranjan Dash, Minh Tue
MIDDLEWARE
2004
Springer
14 years 3 months ago
Ganymed: Scalable Replication for Transactional Web Applications
Data grids, large scale web applications generating dynamic content and database service providing pose significant scalability challenges to database engines. Replication is the ...
Christian Plattner, Gustavo Alonso
FAC
2002
78views more  FAC 2002»
13 years 9 months ago
A Refinement Calculus for Shared-Variable Parallel and Distributed Programming
Parallel computers have not yet had the expected impact on mainstream computing. Parallelism adds a level of complexity to the programming task that makes it very error-prone. More...
Jürgen Dingel
BMCBI
2010
175views more  BMCBI 2010»
13 years 9 months ago
Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspe
Background: RNA structure prediction problem is a computationally complex task, especially with pseudo-knots. The problem is well-studied in existing literature and predominantly ...
S. P. T. Krishnan, Sim Sze Liang, Bharadwaj Veerav...