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TCBB
2010
114views more  TCBB 2010»
13 years 8 months ago
Cache-Oblivious Dynamic Programming for Bioinformatics
— We present efficient cache-oblivious algorithms for some well-studied string problems in bioinformatics including the longest common subsequence, global pairwise sequence alig...
Rezaul Alam Chowdhury, Hai-son Le, Vijaya Ramachan...
EUROSYS
2007
ACM
14 years 7 months ago
Thread clustering: sharing-aware scheduling on SMP-CMP-SMT multiprocessors
The major chip manufacturers have all introduced chip multiprocessing (CMP) and simultaneous multithreading (SMT) technology into their processing units. As a result, even low-end...
David K. Tam, Reza Azimi, Michael Stumm
CASES
2001
ACM
14 years 2 months ago
Transparent data-memory organizations for digital signal processors
Today's digital signal processors (DSPs), unlike general-purpose processors, use a non-uniform addressing model in which the primary components of the memory system--the DRAM...
Sadagopan Srinivasan, Vinodh Cuppu, Bruce L. Jacob
ICSEA
2007
IEEE
14 years 4 months ago
A Model for the Effect of Caching on Algorithmic Efficiency in Radix based Sorting
— This paper demonstrates that the algorithmic performance of end user programs may be greatly affected by the two or three level caching scheme of the processor, and we introduc...
Arne Maus, Stein Gjessing
ATAL
2004
Springer
14 years 3 months ago
Experiments in Human Multi-Issue Negotiation: Analysis and Support
The purpose of this paper is to report on experiments in (human) multi-issue negotiation and their analysis, and to present a generic software environment supporting such an analy...
Tibor Bosse, Catholijn M. Jonker, Jan Treur