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    BMCBI
    2005
    246views more  BMCBI 2005»
    ParPEST: a pipeline for EST data analysis based on parallel computing
    13 years 6 months ago
    ParPEST: a pipeline for EST data analysis based on parallel computing
    Download  www.biomedcentral.com
    Background: Expressed Sequence Tags (ESTs) are short and error-prone DNA sequences generated from the 5' and 3' ends of randomly selected cDNA clones. They provide an im...
    Nunzio D'Agostino, Mario Aversano, Maria Luisa Chi...
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    BMCBI
    2004
    134views more  BMCBI 2004»
    Bayesian model accounting for within-class biological variability in Serial Analysis of Gene Expression (SAGE)
    13 years 6 months ago
    Bayesian model accounting for within-class biological variability in Serial Analysis of Gene Expression (SAGE)
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    Background: An important challenge for transcript counting methods such as Serial Analysis of Gene Expression (SAGE), "Digital Northern" or Massively Parallel Signature ...
    Ricardo Z. N. Vêncio, Helena Brentani, Diogo...
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    BMCBI
    2002
    108views more  BMCBI 2002»
    A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure
    13 years 6 months ago
    A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure
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    Background: Covariance models (CMs) are probabilistic models of RNA secondary structure, analogous to profile hidden Markov models of linear sequence. The dynamic programming algo...
    Sean R. Eddy
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    CAI
    2002
    Springer
    198views Information Technology» more  CAI 2002»
    The Computing and Data Grid Approach: Infrastructure for Distributed Science Applications
    13 years 6 months ago
    The Computing and Data Grid Approach: Infrastructure for Distributed Science Applications
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    Grid technology has evolved over the past several years to provide the services and infrastructure needed for building "virtual" systems and organizations. With this Gri...
    William E. Johnston
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    COLING
    2002
    153views Computational Linguistics» more  COLING 2002»
    Creating a Finite-State Parser with Application Semantics
    13 years 6 months ago
    Creating a Finite-State Parser with Application Semantics
    Download  acl.ldc.upenn.edu
    Parsli is a finite-state (FS) parser which can be tailored to the lexicon, syntax, and semantics of a particular application using a hand-editable declarative lexicon. The lexicon...
    Owen Rambow, Srinivas Bangalore, Tahir Butt, Alexi...
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