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» The Equivalence between Biology and Computation
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BMCBI
2004
154views more  BMCBI 2004»
13 years 10 months ago
Computation of elementary modes: a unifying framework and the new binary approach
Background: Metabolic pathway analysis has been recognized as a central approach to the structural analysis of metabolic networks. The concept of elementary (flux) modes provides ...
Julien Gagneur, Steffen Klamt
BMCBI
2010
132views more  BMCBI 2010»
13 years 11 months ago
Consistency, comprehensiveness, and compatibility of pathway databases
Background: It is necessary to analyze microarray experiments together with biological information to make better biological inferences. We investigate the adequacy of current bio...
Donny Soh, Difeng Dong, Yike Guo, Limsoon Wong
RECOMB
2006
Springer
14 years 11 months ago
Permutation Filtering: A Novel Concept for Significance Analysis of Large-Scale Genomic Data
Permutation of class labels is a common approach to build null distributions for significance analyis of microarray data. It is assumed to produce random score distributions, which...
Stefanie Scheid, Rainer Spang
ICCAD
2001
IEEE
89views Hardware» more  ICCAD 2001»
14 years 7 months ago
Sequential SPFDs
SPFDs are a mechanism to express flexibility in Boolean networks. Introduced by Yamashita et al. in the context of FPGA synthesis [4], they were extended later to general combina...
Subarnarekha Sinha, Andreas Kuehlmann, Robert K. B...
CDC
2010
IEEE
152views Control Systems» more  CDC 2010»
13 years 6 months ago
Asymptotic achievability for linear time invariant state space systems
Abstract-- We consider here the problem of finding a controller such that when interconnected to the plant, we obtain a system which is asymptotically equivalent to a desired syste...
Harsh Vinjamoor, Arjan van der Schaft