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» The method of combinatorial telescoping
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ICAISC
2010
Springer
13 years 10 months ago
Computer Assisted Peptide Design and Optimization with Topology Preserving Neural Networks
Abstract. We propose a non-standard neural network called TPNN which offers the direct mapping from a peptide sequence to a property of interest in order to model the quantitative ...
Jörg D. Wichard, Sebastian Bandholtz, Carsten...
SODA
2007
ACM
76views Algorithms» more  SODA 2007»
13 years 10 months ago
An unbiased pointing operator for unlabeled structures, with applications to counting and sampling
We introduce a general method to count and randomly sample unlabeled combinatorial structures. The approach is based on pointing unlabeled structures in an “unbiased” way, i.e...
Manuel Bodirsky, Éric Fusy, Mihyun Kang, St...
FOGA
2011
12 years 12 months ago
Approximating the distribution of fitness over hamming regions
The distribution of fitness values across a set of states sharply influences the dynamics of evolutionary processes and heuristic search in combinatorial optimization. In this p...
Andrew M. Sutton, Darrell Whitley, Adele E. Howe
AAAI
2012
11 years 11 months ago
Adaptive Polling for Information Aggregation
The flourishing of online labor markets such as Amazon Mechanical Turk (MTurk) makes it easy to recruit many workers for solving small tasks. We study whether information elicita...
Thomas Pfeiffer, Xi Alice Gao, Yiling Chen, Andrew...
BMCBI
2008
98views more  BMCBI 2008»
13 years 8 months ago
GBNet: Deciphering regulatory rules in the co-regulated genes using a Gibbs sampler enhanced Bayesian network approach
Background: Combinatorial regulation of transcription factors (TFs) is important in determining the complex gene expression patterns particularly in higher organisms. Deciphering ...
Li Shen, Jie Liu, Wei Wang