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» Tiling array data analysis: a multiscale approach using wave...
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BMCBI
2007
130views more  BMCBI 2007»
13 years 8 months ago
Differential analysis for high density tiling microarray data
Background: High density oligonucleotide tiling arrays are an effective and powerful platform for conducting unbiased genome-wide studies. The ab initio probe selection method emp...
Srinka Ghosh, Heather A. Hirsch, Edward A. Sekinge...
ATAL
2010
Springer
13 years 9 months ago
Using geometric diffusions for recognition-primed multi-agent decision making
Several areas of multi-agent research, such as large-scale agent organization and experience-based decision making, demand novel perspectives and efficient approaches for multisca...
Xiaocong Fan, Meng Su
BMCBI
2007
123views more  BMCBI 2007»
13 years 8 months ago
Normalization and experimental design for ChIP-chip data
Background: Chromatin immunoprecipitation on tiling arrays (ChIP-chip) has been widely used to investigate the DNA binding sites for a variety of proteins on a genome-wide scale. ...
Shouyong Peng, Artyom A. Alekseyenko, Erica Larsch...
IEEEPACT
2009
IEEE
14 years 3 months ago
Data Layout Transformation for Enhancing Data Locality on NUCA Chip Multiprocessors
—With increasing numbers of cores, future CMPs (Chip Multi-Processors) are likely to have a tiled architecture with a portion of shared L2 cache on each tile and a bankinterleave...
Qingda Lu, Christophe Alias, Uday Bondhugula, Thom...
BMCBI
2007
180views more  BMCBI 2007»
13 years 8 months ago
Using expression arrays for copy number detection: an example from E. coli
Background: The sequencing of many genomes and tiling arrays consisting of millions of DNA segments spanning entire genomes have made high-resolution copy number analysis possible...
Dmitriy Skvortsov, Diana Abdueva, Michael E. Stitz...