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» Using Neural Nets to Estimate Evolutionary Parameters
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EH
1999
IEEE
351views Hardware» more  EH 1999»
14 years 22 days ago
Evolvable Hardware or Learning Hardware? Induction of State Machines from Temporal Logic Constraints
Here we advocate an approach to learning hardware based on induction of finite state machines from temporal logic constraints. The method involves training on examples, constraint...
Marek A. Perkowski, Alan Mishchenko, Anatoli N. Ch...
GECCO
2005
Springer
180views Optimization» more  GECCO 2005»
14 years 1 months ago
Inference of gene regulatory networks using s-system and differential evolution
In this work we present an improved evolutionary method for inferring S-system model of genetic networks from the time series data of gene expression. We employed Differential Ev...
Nasimul Noman, Hitoshi Iba
NIPS
2008
13 years 9 months ago
A spatially varying two-sample recombinant coalescent, with applications to HIV escape response
Statistical evolutionary models provide an important mechanism for describing and understanding the escape response of a viral population under a particular therapy. We present a ...
Alexander Braunstein, Zhi Wei, Shane T. Jensen, Jo...
BMCBI
2007
144views more  BMCBI 2007»
13 years 8 months ago
Accelerated search for biomolecular network models to interpret high-throughput experimental data
Background: The functions of human cells are carried out by biomolecular networks, which include proteins, genes, and regulatory sites within DNA that encode and control protein e...
Suman Datta, Bahrad A. Sokhansanj
ICMLA
2007
13 years 9 months ago
Machine learned regression for abductive DNA sequencing
We construct machine learned regressors to predict the behaviour of DNA sequencing data from the fluorescent labelled Sanger method. These predictions are used to assess hypothes...
David Thornley, Maxim Zverev, Stavros Petridis