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» Using ontologies for simulation integration
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BMCBI
2007
133views more  BMCBI 2007»
13 years 9 months ago
Semantic integration to identify overlapping functional modules in protein interaction networks
Background: The systematic analysis of protein-protein interactions can enable a better understanding of cellular organization, processes and functions. Functional modules can be ...
Young-Rae Cho, Woochang Hwang, Murali Ramanathan, ...
BMCBI
2008
202views more  BMCBI 2008»
13 years 9 months ago
Network motif-based identification of transcription factor-target gene relationships by integrating multi-source biological data
Background: Integrating data from multiple global assays and curated databases is essential to understand the spatiotemporal interactions within cells. Different experiments measu...
Yuji Zhang, Jianhua Xuan, Benildo de los Reyes, Ro...
BMCBI
2008
117views more  BMCBI 2008»
13 years 9 months ago
A probabilistic framework to predict protein function from interaction data integrated with semantic knowledge
Background: The functional characterization of newly discovered proteins has been a challenge in the post-genomic era. Protein-protein interactions provide insights into the funct...
Young-Rae Cho, Lei Shi, Murali Ramanathan, Aidong ...
GECCO
2004
Springer
14 years 2 months ago
Systematic Integration of Parameterized Local Search Techniques in Evolutionary Algorithms
Application-specific, parameterized local search algorithms (PLSAs), in which optimization accuracy can be traded off with runtime, arise naturally in many optimization contexts....
Neal K. Bambha, Shuvra S. Bhattacharyya, Jürg...
DATE
2009
IEEE
129views Hardware» more  DATE 2009»
14 years 3 months ago
Improved performance and variation modelling for hierarchical-based optimisation of analogue integrated circuits
A new approach in hierarchical optimisation is presented which is capable of optimising both the performance and yield of an analogue design. Performance and yield trade offs are ...
Sawal Ali, Li Ke, Reuben Wilcock, Peter Wilson