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JCPHY
2011
192views more  JCPHY 2011»
13 years 1 months ago
Fast analysis of molecular dynamics trajectories with graphics processing units - Radial distribution function histogramming
The calculation of radial distribution functions (RDFs) from molecular dynamics trajectory data is a common and computationally expensive analysis task. The rate limiting step in ...
Benjamin G. Levine, John E. Stone, Axel Kohlmeyer
JOC
2011
94views more  JOC 2011»
13 years 1 months ago
Mutual Information Analysis: a Comprehensive Study
Mutual Information Analysis is a generic side-channel distinguisher that has been introduced at CHES 2008. It aims to allow successful attacks requiring minimum assumptions and kno...
Lejla Batina, Benedikt Gierlichs, Emmanuel Prouff,...
MSR
2011
ACM
13 years 1 months ago
Security versus performance bugs: a case study on Firefox
A good understanding of the impact of different types of bugs on various project aspects is essential to improve software quality research and practice. For instance, we would ex...
Shahed Zaman, Bram Adams, Ahmed E. Hassan
NAR
2011
214views Computer Vision» more  NAR 2011»
13 years 1 months ago
IEDB-3D: structural data within the immune epitope database
IEDB-3D is the 3D structural component of the Immune Epitope Database (IEDB) available via the ‘Browse by 3D Structure’ page at http://www.iedb .org. IEDB-3D catalogs B- and T...
Julia V. Ponomarenko, Nikitas Papangelopoulos, Dir...
NAR
2011
234views Computer Vision» more  NAR 2011»
13 years 1 months ago
The UCSC cancer genomics browser: update 2011
The UCSC Cancer Genomics Browser (https:// genome-cancer.ucsc.edu) comprises a suite of web-based tools to integrate, visualize and analyze cancer genomics and clinical data. The ...
J. Zachary Sanborn, Stephen C. Benz, Brian Craft, ...
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