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BIBE
2007
IEEE
168views Bioinformatics» more  BIBE 2007»
14 years 5 months ago
Tissue Identification in Ultrasound Images using Rayleigh Local Parameter Estimation
A method to identify different tissues in ultrasound images is presented. Assuming a Rayleigh modelfor speckle, the different tissues present in the image will be related to the R...
Santiago Aja-Fernández, Marcos Martí...
BIBE
2007
IEEE
113views Bioinformatics» more  BIBE 2007»
14 years 5 months ago
Quantitative and Probabilistic Modeling in Pathway Logic
—This paper presents a study of possible extensions of Pathway Logic to represent and reason about semiquantitative and probabilistic aspects of biological processes. The underly...
Alessandro Abate, Yu Bai, Nathalie Sznajder, Carol...
BIBE
2007
IEEE
191views Bioinformatics» more  BIBE 2007»
14 years 5 months ago
PANP - a New Method of Gene Detection on Oligonucleotide Expression Arrays
Abstract. Currently, the method most used for gene detection calls on Affymetrix oligonucleotide arrays is provided as part of the MAS5.0 software. The MAS method uses Wilcoxon sta...
Peter Warren, Deanne Taylor, Paolo G. V. Martini, ...
BIBE
2007
IEEE
108views Bioinformatics» more  BIBE 2007»
14 years 5 months ago
On the Design of Oligos for Gene Synthesis
— Methods for reliable synthesis of long genes offer great promise for protein synthesis via expression of synthetic genes, with applications to improved analysis of protein stru...
Chris Thachuk, Anne Condon
BIBE
2007
IEEE
214views Bioinformatics» more  BIBE 2007»
14 years 5 months ago
Histogram Transformation for Inter-Modality Image Registration
Abstract—This paper describes an efficient image transformation method based on histogram information and some prior knowledge of tissue expression in different modalities for r...
Joerg Meyer
BIBE
2007
IEEE
127views Bioinformatics» more  BIBE 2007»
14 years 5 months ago
A Heuristic for Phylogenetic Reconstruction Using Transposition
Abstract—Because of the advent of high-throughput sequencing and the consequent reduction in cost of sequencing, many organisms have been completely sequenced and most of their g...
Feng Yue, Meng Zhang, Jijun Tang
BIBE
2007
IEEE
121views Bioinformatics» more  BIBE 2007»
14 years 5 months ago
Identifying Genomic Regulators of Set-Wise Co-Expression
The genetical genomics approach has been used to study the genetic basis of variation in gene expression, where putative transcriptional regulators of genes are identified via gene...
Jung Hoon Woo, Tian Zheng, Ju Han Kim
BIBE
2007
IEEE
108views Bioinformatics» more  BIBE 2007»
14 years 5 months ago
GPX: A Tool for the Exploration and Visualization of Genome Evolution
Neha Nahar, Lutz Hamel, Maria S. Poptsova, J. Pete...
BIBE
2007
IEEE
162views Bioinformatics» more  BIBE 2007»
14 years 5 months ago
An Investigation into the Feasibility of Detecting Microscopic Disease Using Machine Learning
— The prognosis for many cancers could be improved dramatically if they could be detected while still at the microscopic disease stage. We are investigating the possibility of de...
Mary Qu Yang, Jack Y. Yang
BIBE
2007
IEEE
169views Bioinformatics» more  BIBE 2007»
14 years 5 months ago
Combining Semantics, Context, and Statistical Evidence in Genomics Literature Search
—We present an information retrieval model for combining evidence from concept-based semantics, term statistics, and context for improving search precision of genomics literature...
Jay Urbain, Nazli Goharian, Ophir Frieder