A new formalism and approach to describing cellular and molecular processes and structures is introduced, designed to support the creation of knowledge bases of molecular and cell...
We use the data collected by the Lung Image Database Consortium (LIDC) for modeling the radiologists’ nodule interpretations based on image content of the nodule by using decisi...
Ekarin Varutbangkul, Vesna Mitrovic, Daniela Stan ...
—Gene expression profiling in toxicogenomics is often used to find molecular signature of toxicants. The range of doses chosen in toxicogenomics studies does not always represe...
Vincent Guillemot, Cathy Philippe, Arthur Tenenhau...
Co-occurrence matrices are one of three texture algorithms commonly used on Computed Tomography (CT) images. In this paper we analyze the directional invariance of Co-occurrence m...
Carl Philips, Daniel Li, Daniela Stan Raicu, Jacob...
— The way evolution shapes the arrangement of synonymous codons within open reading frames (ORF) for fine tuning mRNA decoding efficiency is not yet understood. Since the ribosom...
We develop a parallel algorithm for a widely used whole genome alignment method called LAGAN. We use the MPI-based protocol to develop parallel solutions for two phases of the alg...
We present an EM-based clustering method that can be used for constructing or augmenting ontologies such as MeSH. Our algorithm simultaneously clusters verbs and nouns using both ...
Vasileios Kandylas, Lyle H. Ungar, Ted Sandler, Sh...
Abstract—The exact relationship between protein active centers and protein functions is unclear even after decades of intensive study. To improve the functional prediction abilit...