Sciweavers

RECOMB
2002
Springer
14 years 7 months ago
Combining pairwise sequence similarity and support vector machines for remote protein homology detection
One key element in understanding the molecular machinery of the cell is to understand the meaning, or function, of each protein encoded in the genome. A very successful means of i...
Li Liao, William Stafford Noble
RECOMB
2002
Springer
14 years 7 months ago
Phase-independent rhythmic analysis of genome-wide expression patterns
We introduce a model-based analysis technique for extracting and characterizing rhythmic expression pro les from genome-wide DNA microarray hybridization data. These patterns are ...
Christopher James Langmead, Anthony K. Yan, C. Rob...
RECOMB
2002
Springer
14 years 7 months ago
Finding motifs in the twilight zone
We introduce the notion of a multiprofile and use it for finding subtle motifs in DNA sequences. Multiprofiles generalize the notion of a profile and allow one to detect subtle co...
Uri Keich, Pavel A. Pevzner
RECOMB
2002
Springer
14 years 7 months ago
Approximate matching of secondary structures
This talk presents an algorithm to search for all approximate matches of a helix in a genome, where a helix is a combination of sequence and folding constraints. It is a joint wor...
Nadia El-Mabrouk, Mathieu Raffinot
RECOMB
2002
Springer
14 years 7 months ago
Tests for gene clustering
Comparing chromosomal gene order in two or more related species is an important approach to studying the forces that guide genome organization and evolution. Linked clusters of si...
Dannie Durand, David Sankoff
RECOMB
2002
Springer
14 years 7 months ago
A bayesian approach to transcript estimation from gene array data: the BEAM technique
We present a new statistically optimal approach to estimate transcript levels and ratios from one or more gene array experiments. The Bayesian Estimation of Array Measurements (BE...
Ron O. Dror, Jonathan G. Murnick, Nicola A. Rinald...
RECOMB
2002
Springer
14 years 7 months ago
Inferring domain-domain interactions from protein-protein interactions
Minghua Deng, Shipra Mehta, Fengzhu Sun, Ting Chen
RECOMB
2002
Springer
14 years 7 months ago
Handling long targets and errors in sequencing by hybridization
Eran Halperin, Shay Halperin, Tzvika Hartman, Ron ...