RECOMB
2002
Springer
14 years 8 months ago
2002
Springer
In the class of repeated sequences that occur in DNA, minisatellites have been found polymorphic and became useful tools in genetic mapping and forensic studies. They consist of a...
RECOMB
2002
Springer
14 years 8 months ago
2002
Springer
We develop techniques to estimate the statistical significance of gap-free alignments between two genomic DNA sequences, using human-mouse alignments as an example. The sequences ...
RECOMB
2002
Springer
14 years 8 months ago
2002
Springer
RECOMB
2002
Springer
14 years 8 months ago
2002
Springer
We present algorithms for time-series gene expression analysis that permit the principled estimation of unobserved timepoints, clustering, and dataset alignment. Each expression p...
RECOMB
2002
Springer
14 years 8 months ago
2002
Springer
RECOMB
2002
Springer
14 years 8 months ago
2002
Springer
This paper concerns the discovery of patterns in gene expression matrices, in which each element gives the expression level of a given gene in a given experiment. Most existing me...
RECOMB
2002
Springer
14 years 8 months ago
2002
Springer
We introduce a model of DNA sequence evolution which can account for biases in mutation rates that depend on the identity of the neighboring bases. An analytic solution for this c...
RECOMB
2002
Springer
14 years 8 months ago
2002
Springer
The problem of characterizing and detecting recurrent sequence patterns such as substrings or motifs and related associations or rules is variously pursued in order to compress da...
RECOMB
2002
Springer
14 years 8 months ago
2002
Springer
RECOMB
2002
Springer
14 years 8 months ago
2002
Springer
The field of algorithms for pairwisc biosequence similarity search is dominated by heuristic methods of high efficiency but uncertain sensitivity. One reason that more formal stri...