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NAR
2011
232views Computer Vision» more  NAR 2011»
13 years 3 months ago
REDfly v3.0: toward a comprehensive database of transcriptional regulatory elements in Drosophila
The REDfly database of Drosophila transcriptional cis-regulatory elements provides the broadest and most comprehensive available resource for experimentally validated cis-regulato...
Steven M. Gallo, Dave T. Gerrard, David Miner, Mic...
NAR
2011
330views Computer Vision» more  NAR 2011»
13 years 3 months ago
Hymenoptera Genome Database: integrated community resources for insect species of the order Hymenoptera
The Hymenoptera Genome Database (HGD) is a comprehensive model organism database that caters to the needs of scientists working on insect species of the order Hymenoptera. This sy...
Monica C. Munoz-Torres, Justin T. Reese, Christoph...
NAR
2011
238views Computer Vision» more  NAR 2011»
13 years 3 months ago
COMBREX: a project to accelerate the functional annotation of prokaryotic genomes
COMBREX (http://combrex.bu.edu) is a project to increase the speed of the functional annotation of new bacterial and archaeal genomes. It consists of a database of functional pred...
Richard J. Roberts, Yi-Chien Chang, Zhenjun Hu, Jo...
NAR
2011
241views Computer Vision» more  NAR 2011»
13 years 3 months ago
PRIDB: a protein-RNA interface database
The Protein–RNA Interface Database (PRIDB) is a comprehensive database of protein–RNA interfaces extracted from complexes in the Protein Data Bank (PDB). It is designed to fac...
Benjamin A. Lewis, Rasna R. Walia, Michael Terribi...
NAR
2011
208views Computer Vision» more  NAR 2011»
13 years 3 months ago
The Pancreatic Expression database: 2011 update
The Pancreatic Expression database (PED, http:// www.pancreasexpression.org) has established itself as the main repository for pancreatic-derived -omics data. For the past 3 years...
Rosalind J. Cutts, Emanuela Gadaleta, Stephan A. H...
NAR
2011
244views Computer Vision» more  NAR 2011»
13 years 3 months ago
PROMISCUOUS: a database for network-based drug-repositioning
The procedure of drug approval is time-consuming, costly and risky. Accidental findings regarding multispecificity of approved drugs led to block-busters in new indication areas. ...
Joachim von Eichborn, Manuela S. Murgueitio, Mathi...
NAR
2011
331views Computer Vision» more  NAR 2011»
13 years 3 months ago
Community cyberinfrastructure for Advanced Microbial Ecology Research and Analysis: the CAMERA resource
The Community Cyberinfrastructure for Advanced Microbial Ecology Research and Analysis (CAMERA, http://camera.calit2.net/) is a database and associated computational infrastructur...
Shulei Sun, Jing Chen, Weizhong Li, Ilkay Altintas...
NAR
2011
227views Computer Vision» more  NAR 2011»
13 years 3 months ago
VnD: a structure-centric database of disease-related SNPs and drugs
Numerous genetic variations have been found to be related to human diseases. Significant portion of those affect the drug response as well by changing the protein structure and fu...
Jin Ok Yang, Sangho Oh, Gunhwan Ko, Seong-Jin Park...
NAR
2011
357views Computer Vision» more  NAR 2011»
13 years 3 months ago
miRGator v2.0 : an integrated system for functional investigation of microRNAs
miRGator is an integrated database of microRNA (miRNA)-associated gene expression, target prediction, disease association and genomic annotation, which aims to facilitate function...
Sooyoung Cho, Yukyung Jun, Sanghyun Lee, Hyung-Seo...
NAR
2011
274views Computer Vision» more  NAR 2011»
13 years 3 months ago
A series of PDB related databases for everyday needs
The Protein Data Bank (PDB) is the world-wide repository of macromolecular structure information. We present a series of databases that run parallel to the PDB. Each database hold...
Robbie P. Joosten, Tim A. H. te Beek, Elmar Kriege...