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    APBC
    2004
    116views Bioinformatics» more  APBC 2004»
    Structure-Function Relationship in DNA Sequence Recognition by Transcription Factors
    14 years 28 days ago
    Structure-Function Relationship in DNA Sequence Recognition by Transcription Factors
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    Transcription factors play essential role in the gene regulation in higher organisms, binding to multiple target sequences and regulating multiple genes in a complex manner. In or...
    Akinori Sarai, Samuel Selvaraj, M. Michael Gromiha...
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    APBC
    2004
    141views Bioinformatics» more  APBC 2004»
    Molecular Imaging and Biomedical Process Modeling
    14 years 28 days ago
    Molecular Imaging and Biomedical Process Modeling
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    This paper describes the core theories and enabling technologies developed for molecular imaging at the BMIT Group and the CMSP Center over the last 10 years, in the areas of dyna...
    David Dagan Feng
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    APBC
    2004
    93views Bioinformatics» more  APBC 2004»
    Representing Experimental Biological Data in Metabolic Networks
    14 years 28 days ago
    Representing Experimental Biological Data in Metabolic Networks
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    This paper describes a novel approach to representing experimental biological data in metabolic networks. The aim is to allow biologists to visualise and analyse the data in the c...
    Tim Dwyer, Hardy Rolletschek, Falk Schreiber
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    APBC
    2004
    132views Bioinformatics» more  APBC 2004»
    Multiple Sequence Alignment Using Tabu Search
    14 years 28 days ago
    Multiple Sequence Alignment Using Tabu Search
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    Tariq Riaz, Yi Wang, Kuo-Bin Li
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    APBC
    2004
    97views Bioinformatics» more  APBC 2004»
    EMAGEN: An Efficient Approach to Multiple Whole Genome Alignment
    14 years 28 days ago
    EMAGEN: An Efficient Approach to Multiple Whole Genome Alignment
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    Following advances in biotechnology, many new whole genome sequences are becoming available every year. A lot of useful information can be derived from the alignment and compariso...
    Jitender S. Deogun, Jingyi Yang, Fangrui Ma
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    APBC
    2004
    173views Bioinformatics» more  APBC 2004»
    RNA Secondary Structure Prediction with Simple Pseudoknots
    14 years 28 days ago
    RNA Secondary Structure Prediction with Simple Pseudoknots
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    Pseudoknots are widely occurring structural motifs in RNA. Pseudoknots have been shown to be functionally important in different RNAs which play regulatory, catalytic, or structur...
    Jitender S. Deogun, Ruben Donts, Olga Komina, Fang...
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    APBC
    2004
    125views Bioinformatics» more  APBC 2004»
    A Dihedral Angle Database of Short Sub-sequences for Protein Structure Prediction
    14 years 28 days ago
    A Dihedral Angle Database of Short Sub-sequences for Protein Structure Prediction
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    Protein structure prediction is considered to be the holy grail of bioinformatics. Ab initio and homology modelling are two important groups of methods used in protein structure p...
    Saravanan Dayalan, Savitri Bevinakoppa, Heiko Schr...
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    APBC
    2004
    107views Bioinformatics» more  APBC 2004»
    An Empirical Bayes Adjustment to Multiple p-values for the Detection of Differentially Expressed Genes in Microarray Experiments
    14 years 28 days ago
    An Empirical Bayes Adjustment to Multiple p-values for the Detection of Differentially Expressed Genes in Microarray Experiments
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    In recent microarray experiments thousands of gene expressions are simultaneously tested in comparing samples (e.g., tissue types or experimental conditions). Application of a sta...
    Somnath Datta, Susmita Datta
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    APBC
    2004
    108views Bioinformatics» more  APBC 2004»
    Ladderlike Stepping and Interval Jumping Searching Algorithms for DNA Sequences
    14 years 28 days ago
    Ladderlike Stepping and Interval Jumping Searching Algorithms for DNA Sequences
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    In this study we have designed a novel algorithm for searching common segments in multiple DNA sequences. To improve efficiency in pattern searching, combination of hashing encodi...
    Tun-Wen Pai, Margaret Dah-Tsyr Chang, Jia-Han Chu,...
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    APBC
    2004
    138views Bioinformatics» more  APBC 2004»
    Whole-Genome Functional Classification of Genes by Latent Semantic Analysis on Microarray Data
    14 years 28 days ago
    Whole-Genome Functional Classification of Genes by Latent Semantic Analysis on Microarray Data
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    Quantitative simultaneous monitoring of the expression levels of thousands of genes under various experimental conditions is now possible using microarray experiments. The resulti...
    See-Kiong Ng, Zexuan Zhu, Yew-Soon Ong
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