Sciweavers

BMCBI
2006
114views more  BMCBI 2006»
13 years 11 months ago
Mining frequent patterns for AMP-activated protein kinase regulation on skeletal muscle
Background: AMP-activated protein kinase (AMPK) has emerged as a significant signaling intermediary that regulates metabolisms in response to energy demand and supply. An investig...
Qingfeng Chen, Yi-Ping Phoebe Chen
BMCBI
2006
129views more  BMCBI 2006»
13 years 11 months ago
Identifying genes that contribute most to good classification in microarrays
Background: The goal of most microarray studies is either the identification of genes that are most differentially expressed or the creation of a good classification rule. The dis...
Stuart G. Baker, Barnett S. Kramer
BMCBI
2006
141views more  BMCBI 2006»
13 years 11 months ago
Visual setup of logical models of signaling and regulatory networks with ProMoT
Background: The analysis of biochemical networks using a logical (Boolean) description is an important approach in Systems Biology. Recently, new methods have been proposed to ana...
Julio Saez-Rodriguez, Sebastian Mirschel, Rebecca ...
BMCBI
2006
86views more  BMCBI 2006»
13 years 11 months ago
PHY*FI: fast and easy online creation and manipulation of phylogeny color figures
nd: The need to depict a phylogeny, or some other kind of abstract tree, is very frequently experienced by researchers from a broad range of biological and computational disciplin...
Jakob Fredslund
BMCBI
2006
86views more  BMCBI 2006»
13 years 11 months ago
Integrated siRNA design based on surveying of features associated with high RNAi effectiveness
Wuming Gong, Yongliang Ren, Qiqi Xu, Yejun Wang, D...
BMCBI
2006
79views more  BMCBI 2006»
13 years 11 months ago
The effects of multiple features of alternatively spliced exons on the KA/KS ratio test
Background: The evolution of alternatively spliced exons (ASEs) is of primary interest because these exons are suggested to be a major source of functional diversity of proteins. ...
Feng-Chi Chen, Trees-Juen Chuang
BMCBI
2006
67views more  BMCBI 2006»
13 years 11 months ago
A simple method to combine multiple molecular biomarkers for dichotomous diagnostic classification
Background: In spite of the recognized diagnostic potential of biomarkers, the quest for squelching noise and wringing in information from a given set of biomarkers continues. Her...
Manju R. Mamtani, Tushar P. Thakre, Mrunal Y. Kalk...
BMCBI
2006
76views more  BMCBI 2006»
13 years 11 months ago
Coloring the Mu transpososome
Background: Tangle analysis has been applied successfully to study proteins which bind two segments of DNA and can knot and link circular DNA. We show how tangle analysis can be e...
Isabel K. Darcy, Jeff Chang, Nathan Druivenga, Col...
BMCBI
2006
167views more  BMCBI 2006»
13 years 11 months ago
The bovine QTL viewer: a web accessible database of bovine Quantitative Trait Loci
Background: Many important agricultural traits such as weight gain, milk fat content and intramuscular fat (marbling) in cattle are quantitative traits. Most of the information on...
Pavana Polineni, Prathyusha Aragonda, Suresh R. Xa...
BMCBI
2006
141views more  BMCBI 2006»
13 years 11 months ago
The use of concept maps during knowledge elicitation in ontology development processes - the nutrigenomics use case
Background: Incorporation of ontologies into annotations has enabled 'semantic integration' of complex data, making explicit the knowledge within a certain field. One of...
Alexander García Castro, Philippe Rocca-Ser...