Sciweavers

CSB
2005
IEEE
136views Bioinformatics» more  CSB 2005»
14 years 5 months ago
An Algebraic Geometry Approach to Protein Structure Determination from NMR Data
Our paper describes the first provably-efficient algorithm for determining protein structures de novo, solely from experimental data. We show how the global nature of a certain ...
Lincong Wang, Ramgopal R. Mettu, Bruce Randall Don...
CSB
2005
IEEE
115views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Mining Protein Sequence Motifs Representing Common 3D Structures
Understanding the relationship between protein structure and its sequence is one of the most important tasks of current bioinformatics research. In this work, recurring protein se...
Wei Zhong, Gulsah Altun, Robert W. Harrison, Phang...
CSB
2005
IEEE
114views Bioinformatics» more  CSB 2005»
14 years 5 months ago
EigenPhenotypes: Towards an Algorithmic Framework for Phenotype Discovery
Studying the genetic control of molecular, anatomical and/or morphological phenotypes in model organisms is a powerful tool in the functional analysis of a gene. The goal of our r...
Alexander Vaughan, Rahul Singh, Ilmi Yoon, Megumi ...
CSB
2005
IEEE
223views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Automatic Protein Function Annotation through Candidate Ortholog Clusters from Incomplete Genomes
Annotation of protein function often arises in the context of partially complete genomes but is not adequately addressed. We present an annotation method by extracting ortholog cl...
Akshay Vashist, Casimir A. Kulikowski, Ilya B. Muc...
CSB
2005
IEEE
151views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Lossless Compression of DNA Microarray Images
Microarray experiments are characterized by a massive amount of data, usually in the form of an image. Based on the nature of microarray images, we consider the microarray in term...
Yong Zhang, Rahul Parthe, Donald A. Adjeroh
CSB
2005
IEEE
133views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Sequential Classification for Microarray and Clinical Data
Sequential classification uses in a stepwise process only part of the data (evidence) for partial classification, i.e., classifying only objects with sufficient evidence and leavi...
Günter Tusch
CSB
2005
IEEE
151views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Analysis of SNP-Expression Association Matrices
High throughput expression profiling and genotyping technologies provide the means to study the genetic determinants of population variation in gene expression variation. In this ...
Anya Tsalenko, Roded Sharan, Hege Edvardsen, Vesse...
CSB
2005
IEEE
136views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Key Features of the UCSC Genome Site
The UCSC Genome site has been contributing to the public genomics community for over 5 years. We wish to highlight the key features, both new and old.
Heather Trumbower, Jennifer Jackson
CSB
2005
IEEE
126views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Identifying Simple Discriminatory Gene Vectors with an Information Theory Approach
In the feature selection of cancer classification problems, many existing methods consider genes individually by choosing the top genes which have the most significant signal-to...
Zheng Yun, Kwoh Chee Keong