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    NAR
    2006
    85views more  NAR 2006»
    WormBase: better software, richer content
    14 years 21 days ago
    WormBase: better software, richer content
    Download  authors.library.caltech.edu
    WormBase (http://wormbase.org), the public database for genomics and biology of Caenorhabditis elegans, has been restructured for stronger performance and expanded for richer biol...
    Erich M. Schwarz, Igor Antoshechkin, Carol Bastian...
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    NAR
    2006
    77views more  NAR 2006»
    SMART 5: domains in the context of genomes and networks
    14 years 21 days ago
    SMART 5: domains in the context of genomes and networks
    Download  www.letunic.com
    The Simple Modular Architecture Research Tool 10 (SMART) is an online resource (http://smart.embl. de/) used for protein domain identification and the analysis of protein domain a...
    Ivica Letunic, Richard R. Copley, Birgit Pils, Ste...
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    NAR
    2006
    113views more  NAR 2006»
    ASD: a bioinformatics resource on alternative splicing
    14 years 21 days ago
    ASD: a bioinformatics resource on alternative splicing
    Download  www.ebi.ac.uk
    Alternative splicing is an important regulatory mechanism of mammalian gene expression. The alternative splicing database (ASD) consortium is systematically collecting and annotat...
    Stefan Stamm, Jean-Jack M. Riethoven, Vincent Le T...
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    NAR
    2006
    68views more  NAR 2006»
    Panzea: a database and resource for molecular and functional diversity in the maize genome
    14 years 21 days ago
    Panzea: a database and resource for molecular and functional diversity in the maize genome
    Download  www.panzea.org
    Serving as a community resource, Panzea (http:// www.panzea.org) is the bioinformatics arm of the Molecular and Functional Diversity in the Maize Genome project. Maize, a classica...
    Wei Zhao, Payan Canaran, Rebecca Jurkuta, Theresa ...
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    NAR
    2006
    99views more  NAR 2006»
    DiANNA 1.1: an extension of the DiANNA web server for ternary cysteine classification
    14 years 21 days ago
    DiANNA 1.1: an extension of the DiANNA web server for ternary cysteine classification
    Download  clavius.bc.edu
    Fabrizio Ferrè, Peter Clote
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    NAR
    2006
    66views more  NAR 2006»
    MetaCyc: a multiorganism database of metabolic pathways and enzymes
    14 years 21 days ago
    MetaCyc: a multiorganism database of metabolic pathways and enzymes
    Download  www.ai.sri.com
    Ron Caspi, Hartmut Foerster, Carol A. Fulcher, Reb...
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    NAR
    2006
    128views more  NAR 2006»
    Expresso: automatic incorporation of structural information in multiple sequence alignments using 3D-Coffee
    14 years 21 days ago
    Expresso: automatic incorporation of structural information in multiple sequence alignments using 3D-Coffee
    Download  www.plantsciences.ucdavis.edu
    Expresso is a multiple sequence alignment server that aligns sequences using structural information. The user only needs to provide sequences. The server runs BLAST to identify cl...
    Fabrice Armougom, Sébastien Moretti, Olivie...
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    NAR
    2006
    119views more  NAR 2006»
    HHsenser: exhaustive transitive profile search using HMM-HMM comparison
    14 years 21 days ago
    HHsenser: exhaustive transitive profile search using HMM-HMM comparison
    Download  www.eb.tuebingen.mpg.de
    HHsenser is the first server to offer exhaustive intermediate profile searches, which it combines with pairwise comparison of hidden Markov models. Starting from a single protein ...
    Johannes Söding, Michael Remmert, Andreas Bie...
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    NAR
    2006
    129views more  NAR 2006»
    AliWABA: alignment on the web through an A-Bruijn approach
    14 years 21 days ago
    AliWABA: alignment on the web through an A-Bruijn approach
    Download  www.cs.brown.edu
    Multiple sequence alignment programs are an invaluable tool in computational biology. A-Bruijn Alignment (ABA) is a method for multiple sequence alignment that represents an align...
    Neil C. Jones, Degui Zhi, Benjamin J. Raphael
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    NAR
    2006
    81views more  NAR 2006»
    WEGO: a web tool for plotting GO annotations
    14 years 21 days ago
    WEGO: a web tool for plotting GO annotations
    Download  wego.genomics.org.cn
    Jia Ye, Lin Fang, Hongkun Zheng, Yong Zhang, Jie C...
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