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NAR
2011
191views Computer Vision» more  NAR 2011»
13 years 2 months ago
The protein common interface database (ProtCID) - a comprehensive database of interactions of homologous proteins in multiple cr
The protein common interface database (ProtCID) is a database that contains clusters of similar homodimeric and heterodimeric interfaces observed in multiple crystal forms (CFs). ...
Qifang Xu, Roland L. Dunbrack Jr.
NAR
2011
298views Computer Vision» more  NAR 2011»
13 years 6 months ago
PolyQ: a database describing the sequence and domain context of polyglutamine repeats in proteins
The polyglutamine diseases are caused in part by a gain-of-function mechanism of neuronal toxicity involving protein conformational changes that result in the formation and deposi...
Amy L. Robertson, Mark A. Bate, Steve G. Androulak...
NAR
2011
374views Computer Vision» more  NAR 2011»
13 years 6 months ago
The BioGRID Interaction Database: 2011 update
The Biological General Repository for Interaction Datasets (BioGRID) is a public database that archives and disseminates genetic and protein interaction data from model organisms ...
Chris Stark, Bobby-Joe Breitkreutz, Andrew Chatr-a...
NAR
2011
267views Computer Vision» more  NAR 2011»
13 years 6 months ago
EcoCyc: a comprehensive database of Escherichia coli biology
EcoCyc (http://EcoCyc.org) is a comprehensive model organism database for Escherichia coli K-12 MG1655. From the scientific literature, EcoCyc captures the functions of individual...
Ingrid M. Keseler, Julio Collado-Vides, Alberto Sa...
NAR
2011
232views Computer Vision» more  NAR 2011»
13 years 6 months ago
REDfly v3.0: toward a comprehensive database of transcriptional regulatory elements in Drosophila
The REDfly database of Drosophila transcriptional cis-regulatory elements provides the broadest and most comprehensive available resource for experimentally validated cis-regulato...
Steven M. Gallo, Dave T. Gerrard, David Miner, Mic...
NAR
2011
330views Computer Vision» more  NAR 2011»
13 years 6 months ago
Hymenoptera Genome Database: integrated community resources for insect species of the order Hymenoptera
The Hymenoptera Genome Database (HGD) is a comprehensive model organism database that caters to the needs of scientists working on insect species of the order Hymenoptera. This sy...
Monica C. Munoz-Torres, Justin T. Reese, Christoph...
NAR
2011
238views Computer Vision» more  NAR 2011»
13 years 6 months ago
COMBREX: a project to accelerate the functional annotation of prokaryotic genomes
COMBREX (http://combrex.bu.edu) is a project to increase the speed of the functional annotation of new bacterial and archaeal genomes. It consists of a database of functional pred...
Richard J. Roberts, Yi-Chien Chang, Zhenjun Hu, Jo...
NAR
2011
241views Computer Vision» more  NAR 2011»
13 years 6 months ago
PRIDB: a protein-RNA interface database
The Protein–RNA Interface Database (PRIDB) is a comprehensive database of protein–RNA interfaces extracted from complexes in the Protein Data Bank (PDB). It is designed to fac...
Benjamin A. Lewis, Rasna R. Walia, Michael Terribi...
NAR
2011
208views Computer Vision» more  NAR 2011»
13 years 6 months ago
The Pancreatic Expression database: 2011 update
The Pancreatic Expression database (PED, http:// www.pancreasexpression.org) has established itself as the main repository for pancreatic-derived -omics data. For the past 3 years...
Rosalind J. Cutts, Emanuela Gadaleta, Stephan A. H...
NAR
2011
244views Computer Vision» more  NAR 2011»
13 years 6 months ago
PROMISCUOUS: a database for network-based drug-repositioning
The procedure of drug approval is time-consuming, costly and risky. Accidental findings regarding multispecificity of approved drugs led to block-busters in new indication areas. ...
Joachim von Eichborn, Manuela S. Murgueitio, Mathi...