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» A Data Transformation Method Based on Schema Mapping
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BMCBI
2007
126views more  BMCBI 2007»
15 years 4 months ago
Using gene expression data and network topology to detect substantial pathways, clusters and switches during oxygen deprivation
Background: Biochemical investigations over the last decades have elucidated an increasingly complete image of the cellular metabolism. To derive a systems view for the regulation...
Gunnar Schramm, Marc Zapatka, Roland Eils, Rainer ...
BMCBI
2008
121views more  BMCBI 2008»
15 years 4 months ago
iRefIndex: A consolidated protein interaction database with provenance
Background: Interaction data for a given protein may be spread across multiple databases. We set out to create a unifying index that would facilitate searching for these data and ...
Sabry Razick, George Magklaras, Ian M. Donaldson
PODS
2007
ACM
171views Database» more  PODS 2007»
16 years 4 months ago
Monadic datalog over finite structures with bounded treewidth
Bounded treewidth and Monadic Second Order (MSO) logic have proved to be key concepts in establishing fixed-parameter tractability results. Indeed, by Courcelle's Theorem we ...
Georg Gottlob, Reinhard Pichler, Fang Wei
AUSDM
2008
Springer
238views Data Mining» more  AUSDM 2008»
15 years 6 months ago
Graphics Hardware based Efficient and Scalable Fuzzy C-Means Clustering
The exceptional growth of graphics hardware in programmability and data processing speed in the past few years has fuelled extensive research in using it for general purpose compu...
S. A. Arul Shalom, Manoranjan Dash, Minh Tue
RECOMB
2007
Springer
16 years 4 months ago
An Efficient and Accurate Graph-Based Approach to Detect Population Substructure
Currently, large-scale projects are underway to perform whole genome disease association studies. Such studies involve the genotyping of hundreds of thousands of SNP markers. One o...
Srinath Sridhar, Satish Rao, Eran Halperin