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» Biospider: A Web Server for Automating Metabolome Annotation...
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PSB
2007
14 years 8 days ago
Biospider: A Web Server for Automating Metabolome Annotations
Craig Knox, Savita Shrivastava, Paul Stothard, Rom...
NAR
2011
256views Computer Vision» more  NAR 2011»
13 years 1 months ago
ModBase, a database of annotated comparative protein structure models, and associated resources
ModBase (http://salilab.org/modbase) is a database of annotated comparative protein structure models. The models are calculated by ModPipe, an automated modeling pipeline that rel...
Ursula Pieper, Benjamin M. Webb, David T. Barkan, ...
BMCBI
2007
181views more  BMCBI 2007»
13 years 11 months ago
Versatile annotation and publication quality visualization of protein complexes using POLYVIEW-3D
Background: Macromolecular visualization as well as automated structural and functional annotation tools play an increasingly important role in the post-genomic era, contributing ...
Aleksey A. Porollo, Jaroslaw Meller
BMCBI
2008
146views more  BMCBI 2008»
13 years 11 months ago
EST Express: PHP/MySQL based automated annotation of ESTs from expression libraries
Background: Several biological techniques result in the acquisition of functional sets of cDNAs that must be sequenced and analyzed. The emergence of redundant databases such as U...
Robin P. Smith, William J. Buchser, Marcus B. Lemm...
NAR
2007
102views more  NAR 2007»
13 years 10 months ago
ProtSweep, 2Dsweep and DomainSweep: protein analysis suite at DKFZ
The wealth of transcript information that has been made publicly available in recent years has led to large pools of individual web sites offering access to bioinformatics softwar...
Coral del Val, Peter Ernst, Mechthild Falkenhahn, ...