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» Constraints: The Ties that Bind
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BMCBI
2006
111views more  BMCBI 2006»
13 years 7 months ago
PepDist: A New Framework for Protein-Peptide Binding Prediction based on Learning Peptide Distance Functions
Background: Many different aspects of cellular signalling, trafficking and targeting mechanisms are mediated by interactions between proteins and peptides. Representative examples...
Tomer Hertz, Chen Yanover
BMCBI
2007
164views more  BMCBI 2007»
13 years 7 months ago
SEARCHPATTOOL: a new method for mining the most specific frequent patterns for binding sites with application to prokaryotic DNA
Background: Computational methods to predict transcription factor binding sites (TFBS) based on exhaustive algorithms are guaranteed to find the best patterns but are often limite...
Fathi Elloumi, Martha Nason
DAC
2006
ACM
14 years 8 months ago
Optimality study of resource binding with multi-Vdds
Deploying multiple supply voltages (multi-Vdds) on one chip is an important technique to reduce dynamic power consumption. In this work we present an optimality study for resource...
Deming Chen, Jason Cong, Yiping Fan, Junjuan Xu
DAC
2004
ACM
14 years 8 months ago
Memory access scheduling and binding considering energy minimization in multi-bank memory systems
Memory-related activity is one of the major sources of energy consumption in embedded systems. Many types of memories used in embedded systems allow multiple operating modes (e.g....
Chun-Gi Lyuh, Taewhan Kim
DAC
2005
ACM
14 years 8 months ago
Memory access optimization through combined code scheduling, memory allocation, and array binding in embedded system design
In many of embedded systems, particularly for those with high data computations, the delay of memory access is one of the major bottlenecks in the system's performance. It ha...
Jungeun Kim, Taewhan Kim