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» Depth-based inference for functional data
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RECOMB
2006
Springer
14 years 8 months ago
Genome-Wide Discovery of Modulators of Transcriptional Interactions in Human B Lymphocytes
Abstract. Transcriptional interactions in a cell are modulated by a variety of mechanisms that prevent their representation as pure pairwise interactions between a transcription fa...
Kai Wang, Ilya Nemenman, Nilanjana Banerjee, Adam ...
BMCBI
2007
198views more  BMCBI 2007»
13 years 8 months ago
Correlation analysis reveals the emergence of coherence in the gene expression dynamics following system perturbation
Time course gene expression experiments are a popular means to infer co-expression. Many methods have been proposed to cluster genes or to build networks based on similarity measu...
Nicola Neretti, Daniel Remondini, Marc Tatar, John...
CVPR
2009
IEEE
15 years 3 months ago
Global Connectivity Potentials for Random Field Models
Markov random field (MRF, CRF) models are popular in computer vision. However, in order to be computationally tractable they are limited to incorporate only local interactions a...
Sebastian Nowozin, Christoph H. Lampert
CVPR
2008
IEEE
14 years 10 months ago
Active microscopic cellular image annotation by superposable graph transduction with imbalanced labels
Systematic content screening of cell phenotypes in microscopic images has been shown promising in gene function understanding and drug design. However, manual annotation of cells ...
Jun Wang, Shih-Fu Chang, Xiaobo Zhou, Stephen T. C...
ISBI
2009
IEEE
14 years 3 months ago
Detecting Maximal Directional Changes in Spatial fMRI Response Using Canonical Correlation Analysis
Traditional fMRI analysis has focused on modeling temporal changes in BOLD signals on a voxel-by-voxel basis to infer brain activation. To incorporate spatial information, we have...
Bernard Ng, Rafeef Abugharbieh, Martin McKeown