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127
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RECOMB
2006
Springer
16 years 2 months ago
A Probabilistic Model for Gene Content Evolution with Duplication, Loss, and Horizontal Transfer
We introduce a Markov model for the evolution of a gene family along a phylogeny. The model includes parameters for the rates of horizontal gene transfer, gene duplication, and gen...
István Miklós, Miklós Csü...
237
Voted
ECOOP
2009
Springer
16 years 3 months ago
COPE - Automating Coupled Evolution of Metamodels and Models
Model-based development promises to increase productivity by offering modeling languages tailored to a specific domain. Such modeling languages are typically defined by a metamodel...
Elmar Jürgens, Markus Herrmannsdoerfer, Sebas...
113
Voted
GECCO
2004
Springer
150views Optimization» more  GECCO 2004»
15 years 8 months ago
Systems Biology Modeling in Human Genetics Using Petri Nets and Grammatical Evolution
Understanding the hierarchical relationships among biochemical, metabolic, and physiological systems in the mapping between genotype and phenotype is expected to improve the diagno...
Jason H. Moore, Lance W. Hahn
TCBB
2011
14 years 9 months ago
Information-Theoretic Model of Evolution over Protein Communication Channel
—In this paper, we propose a communication model of evolution and investigate its information-theoretic bounds. The process of evolution is modeled as the retransmission of infor...
Liuling Gong, Nidhal Bouaynaya, Dan Schonfeld
ECAL
2005
Springer
15 years 8 months ago
Simulating Evolution with a Computational Model of Embryogeny: Obtaining Robustness from Evolved Individuals
Abstract. An evolutionary system is presented which employs an embryogeny model to evolve phenotypes in the form of layout of cells in specific patterns and shapes. It is shown th...
Chris P. Bowers