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» Extensions to gene set enrichment
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NAR
2010
143views more  NAR 2010»
13 years 4 months ago
WormBase: a comprehensive resource for nematode research
WormBase (http://www.wormbase.org) is a central data repository for nematode biology. Initially created as a service to the Caenorhabditis elegans research field, WormBase has evo...
Todd W. Harris, Igor Antoshechkin, Tamberlyn Bieri...
BMCBI
2007
109views more  BMCBI 2007»
13 years 10 months ago
A cis-regulatory logic simulator
Background: A major goal of computational studies of gene regulation is to accurately predict the expression of genes based on the cis-regulatory content of their promoters. The d...
Robert D. Zeigler, Jason Gertz, Barak A. Cohen
BMCBI
2010
161views more  BMCBI 2010»
13 years 10 months ago
GATExplorer: Genomic and Transcriptomic Explorer; mapping expression probes to gene loci, transcripts, exons and ncRNAs
Background: Genome-wide expression studies have developed exponentially in recent years as a result of extensive use of microarray technology. However, expression signals are typi...
Alberto Risueño, Celia Fontanillo, Marcel E...
BMCBI
2008
97views more  BMCBI 2008»
13 years 10 months ago
A Population Proportion approach for ranking differentially expressed genes
Background: DNA microarrays are used to investigate differences in gene expression between two or more classes of samples. Most currently used approaches compare mean expression l...
Mugdha Gadgil
NAR
2011
218views Computer Vision» more  NAR 2011»
13 years 21 days ago
Allele frequency net: a database and online repository for immune gene frequencies in worldwide populations
The allele frequency net database (http://www .allelefrequencies.net) is an online repository that contains information on the frequencies of immune genes and their corresponding ...
Faviel F. Gonzalez-Galarza, Stephen Christmas, Der...