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» Logspace Complexity of Functions and Structures
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BMCBI
2007
153views more  BMCBI 2007»
13 years 10 months ago
An exploration of alternative visualisations of the basic helix-loop-helix protein interaction network
Background: Alternative representations of biochemical networks emphasise different aspects of the data and contribute to the understanding of complex biological systems. In this ...
Brian J. Holden, John W. Pinney, Simon C. Lovell, ...
BMCBI
2011
13 years 4 months ago
The PathOlogist: An Automated Tool for Pathway-Centric Analysis
Background: The PathOlogist is a new tool designed to transform large sets of gene expression data into quantitative descriptors of pathway-level behavior. The tool aims to provid...
Sharon I. Greenblum, Sol Efroni, Carl F. Schaefer,...
STACS
2010
Springer
14 years 5 months ago
Evasiveness and the Distribution of Prime Numbers
Abstract. A Boolean function on N variables is called evasive if its decision-tree complexity is N. A sequence Bn of Boolean functions is eventually evasive if Bn is evasive for al...
László Babai, Anandam Banerjee, Ragh...
BMCBI
2010
127views more  BMCBI 2010»
13 years 10 months ago
PeptideMine - A webserver for the design of peptides for protein-peptide binding studies derived from protein-protein interactom
Background: Signal transduction events often involve transient, yet specific, interactions between structurally conserved protein domains and polypeptide sequences in target prote...
Khader Shameer, Lalima L. Madan, Shivamurthy Veera...
ICCAD
1999
IEEE
148views Hardware» more  ICCAD 1999»
14 years 2 months ago
SAT based ATPG using fast justification and propagation in the implication graph
In this paper we present new methods for fast justification and propagation in the implication graph (IG) which is the core data structure of our SAT based implication engine. As ...
Paul Tafertshofer, Andreas Ganz