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» On sets not belonging to algebras
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BMCBI
2007
130views more  BMCBI 2007»
13 years 10 months ago
HMM-ModE - Improved classification using profile hidden Markov models by optimising the discrimination threshold and modifying e
Background: Profile Hidden Markov Models (HMM) are statistical representations of protein families derived from patterns of sequence conservation in multiple alignments and have b...
Prashant K. Srivastava, Dhwani K. Desai, Soumyadee...
BMCBI
2008
146views more  BMCBI 2008»
13 years 10 months ago
Can molecular dynamics simulations help in discriminating correct from erroneous protein 3D models?
Background: Recent approaches for predicting the three-dimensional (3D) structure of proteins such as de novo or fold recognition methods mostly rely on simplified energy potentia...
Jean-François Taly, Antoine Marin, Jean-Fra...
ICML
2006
IEEE
14 years 11 months ago
Higher order learning with graphs
Recently there has been considerable interest in learning with higher order relations (i.e., three-way or higher) in the unsupervised and semi-supervised settings. Hypergraphs and...
Sameer Agarwal, Kristin Branson, Serge Belongie
ICSE
2003
IEEE-ACM
14 years 10 months ago
Scaling Step-Wise Refinement
Step-wise refinement is a powerful paradigm for developing a complex program from a simple program by adding features incrementally. We present the AHEAD (Algebraic Hierarchical Eq...
Don S. Batory, Jacob Neal Sarvela, Axel Rauschmaye...
ICCAD
2004
IEEE
121views Hardware» more  ICCAD 2004»
14 years 7 months ago
Factoring and eliminating common subexpressions in polynomial expressions
Polynomial expressions are used to compute a wide variety of mathematical functions commonly found in signal processing and graphics applications, which provide good opportunities...
Anup Hosangadi, Farzan Fallah, Ryan Kastner