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BMCBI
2010
146views more  BMCBI 2010»
13 years 7 months ago
A pairwise residue contact area-based mean force potential for discrimination of native protein structure
Background: Considering energy function to detect a correct protein fold from incorrect ones is very important for protein structure prediction and protein folding. Knowledge-base...
Shahriar Arab, Mehdi Sadeghi, Changiz Eslahchi, Ha...
BMCBI
2007
102views more  BMCBI 2007»
13 years 7 months ago
Setting up a large set of protein-ligand PDB complexes for the development and validation of knowledge-based docking algorithms
Background: The number of algorithms available to predict ligand-protein interactions is large and ever-increasing. The number of test cases used to validate these methods is usua...
Luis A. Diago, Persy Morell, Longendri Aguilera, E...
ISCA
2007
IEEE
103views Hardware» more  ISCA 2007»
14 years 1 months ago
Ginger: control independence using tag rewriting
The negative performance impact of branch mis-predictions can be reduced by exploiting control independence (CI). When a branch mis-predicts, the wrong-path instructions up to the...
Andrew D. Hilton, Amir Roth
CODES
2005
IEEE
14 years 1 months ago
SOMA: a tool for synthesizing and optimizing memory accesses in ASICs
Arbitrary memory dependencies and variable latency memory systems are major obstacles to the synthesis of large-scale ASIC systems in high-level synthesis. This paper presents SOM...
Girish Venkataramani, Tiberiu Chelcea, Seth Copen ...
CASES
2007
ACM
13 years 11 months ago
Performance optimal processor throttling under thermal constraints
We derive analytically, the performance optimal throttling curve for a processor under thermal constraints for a given task sequence. We found that keeping the chip temperature co...
Ravishankar Rao, Sarma B. K. Vrudhula