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    NAR
    2011
    257views Computer Vision» more  NAR 2011»
    The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored
    12 years 9 months ago
    The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored
    Download  nar.oxfordjournals.org
    An essential prerequisite for any systems-level understanding of cellular functions is to correctly uncover and annotate all functional interactions among proteins in the cell. To...
    Damian Szklarczyk, Andrea Franceschini, Michael Ku...
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    NAR
    2007
    155views more  NAR 2007»
    AthaMap web tools for the analysis and identification of co-regulated genes
    13 years 6 months ago
    AthaMap web tools for the analysis and identification of co-regulated genes
    Download  www.athamap.de
    The AthaMap database generates a map of cisregulatory elements for the whole Arabidopsis thaliana genome. This database has been extended by new tools to identify common cis-regul...
    Claudia Galuschka, Martin Schindler, Lorenz Bü...
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    BMCBI
    2011
    230views Artificial Intelligence» more  BMCBI 2011»
    DoBo: Protein domain boundary prediction by integrating evolutionary signals and machine learning
    13 years 1 months ago
    DoBo: Protein domain boundary prediction by integrating evolutionary signals and machine learning
    Download  www.biomedcentral.com
    Background: Accurate identification of protein domain boundaries is useful for protein structure determination and prediction. However, predicting protein domain boundaries from a...
    Jesse Eickholt, Xin Deng, Jianlin Cheng
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    BMCBI
    2007
    148views more  BMCBI 2007»
    Blast sampling for structural and functional analyses
    13 years 6 months ago
    Blast sampling for structural and functional analyses
    Download  www.biomedcentral.com
    Background: The post-genomic era is characterised by a torrent of biological information flooding the public databases. As a direct consequence, similarity searches starting with ...
    Anne Friedrich, Raymond Ripp, Nicolas Garnier, Emm...
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    BMCBI
    2006
    108views more  BMCBI 2006»
    Gene function classification using Bayesian models with hierarchy-based priors
    13 years 6 months ago
    Gene function classification using Bayesian models with hierarchy-based priors
    Download  www.cs.utoronto.ca
    We investigate the application of hierarchical classification schemes to the annotation of gene function based on several characteristics of protein sequences including phylogenic ...
    Babak Shahbaba, Radford M. Neal
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