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RECONFIG
2015
IEEE
24views VLSI» more  RECONFIG 2015»
8 years 3 months ago
Multiple contexts in a multi-ported VLIW register file implementation
Joost Hoozemans, Jens Johansen, Jeroen van Straten...
RECONFIG
2015
IEEE
36views VLSI» more  RECONFIG 2015»
8 years 3 months ago
Accelerating the construction of BRIEF descriptors using an FPGA-based architecture
Abstract—BRIEF emerged as a novel alternative to conventional floating-point-based descriptors such as SIFT or SURF. In contrast to these descriptors, BRIEF is a descriptor repr...
Roberto de Lima, José Martínez-Carra...
RECONFIG
2015
IEEE
27views VLSI» more  RECONFIG 2015»
8 years 3 months ago
A sparse VLIW instruction encoding scheme compatible with generic binaries
—Very Long Instruction Word (VLIW) processors are commonplace in embedded systems due to their inherent lowpower consumption as the instruction scheduling is performed by the com...
Anthony Brandon, Joost Hoozemans, Jeroen van Strat...
RECOMB
2015
Springer
8 years 3 months ago
A Symmetric Length-Aware Enrichment Test
Young et al. [14] showed that due to gene length bias the popular Fisher Exact Test should not be used to study the association between a group of differentially expressed (DE) ge...
David Manescu, Uri Keich
RECOMB
2015
Springer
8 years 3 months ago
CRISPR Detection from Short Reads Using Partial Overlap Graphs
Clustered regularly interspaced short palindromic repeats (CRISPR) are structured regions in bacterial and archaeal genomes, which are part of an adaptive immune system against pha...
Ilan Ben-Bassat, Benny Chor
RECOMB
2015
Springer
8 years 3 months ago
Learning Microbial Interaction Networks from Metagenomic Count Data
Many microbes associate with higher eukaryotes and impact their vitality. In order to engineer microbiomes for host benefit, we must understand the rules of community assembly and...
Surojit Biswas, Meredith McDonald, Derek S. Lundbe...
RECOMB
2015
Springer
8 years 3 months ago
Locating a Tree in a Phylogenetic Network in Quadratic Time
A fundamental problem in the study of phylogenetic networks is how to determine whether a phylogenetic network displays a phylogenetic tree or not. We develop a quadratic-time alg...
Philippe Gambette, Andreas D. M. Gunawan, Anthony ...
RECOMB
2015
Springer
8 years 3 months ago
HapTree-X: An Integrative Bayesian Framework for Haplotype Reconstruction from Transcriptome and Genome Sequencing Data
Identifying phase information is biomedically important due to the association of complex haplotype effects, such as compound heterozygosity, with disease. As recent next-generat...
Emily Berger, Deniz Yörükoglu, Bonnie Be...
RE
2015
Springer
8 years 3 months ago
A descriptive study of Microsoft's threat modeling technique
Riccardo Scandariato, Kim Wuyts, Wouter Joosen
RE
2015
Springer
8 years 3 months ago
GaiusT: supporting the extraction of rights and obligations for regulatory compliance
Ensuring compliance of software systems with government regulations, policies and laws is a complex problem. Generally speaking, solutions to the problem first identify rights and...
Nicola Zeni, Nadzeya Kiyavitskaya, Luisa Mich, Jam...