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BIOCOMP
2008
14 years 27 days ago
Bioinformatics Tools: Searching for Markers in DNA/RNA Sequences
Research in bioinformatics and computational biology relies heavily on algorithms that facilitate the understanding of biological processes through the application of statistical ...
Kuha Mahalingam, Omar Bagasra
BIOCOMP
2008
14 years 27 days ago
Semantic Discovery of Protein Web Services
- Integrating information about protein sequence and structure allows further exploration and establishment of protein sequence-structure-function relations. However, protein data ...
Xiong Liu, Hassan A. Karimi
BIOCOMP
2008
14 years 27 days ago
Incomparability of Results Between Phylogenetic Search Programs
Kenneth Sundberg, Hyrum Carroll, Quinn Snell, Mark...
BIOCOMP
2007
14 years 27 days ago
Aldose Reductase and Nitric Oxide Synthase Role in Diabetic Retinopathy: A Bioinformatics Study
- Diabetic retinopathy is the leading cause of blindness among patients with diabetes mellitus. We investigated the role of several proteins that are likely to be involved in the d...
Hanuman Thota, Nageswara rao Kunjam, Suresh Babu C...
BIOCOMP
2007
14 years 27 days ago
xMAN: extreme MApping of oligoNucleotides
Background: The ability to rapidly map millions of oligonucleotide fragments to a reference genome is crucial to many high throughput genomic technologies. Results: We propose an ...
Wei Li, Jason S. Carroll, Myles Brown, X. Shirley ...
BIOCOMP
2007
14 years 27 days ago
Stability Analysis of Genetic Regulatory Network with Additive Noises
Background: Genetic regulatory networks (GRN) can be described by differential equations with SUM logic which has been found in many natural systems. Identification of the network...
Yufang Jin
BIOCOMP
2007
14 years 27 days ago
Interaction Models for Biochemical Reactions
Abstract—This paper presents a stochastic modelling framework for complex biochemical reaction networks from a component-based perspective. Our approach takes into account the di...
Mila E. Majster-Cederbaum, Nils Semmelrock, Verena...
BIOCOMP
2007
14 years 27 days ago
Quality-Based Similarity Search for Biological Sequence Databases
Low-Complexity Regions (LCRs) of biological sequences are the main source of false positives in similarity searches for biological sequence databases. We consider the problem of ï...
Xuehui Li, Tamer Kahveci