RECOMB
2006
Springer
14 years 11 months ago
2006
Springer
We introduce a Markov model for the evolution of a gene family along a phylogeny. The model includes parameters for the rates of horizontal gene transfer, gene duplication, and gen...
RECOMB
2006
Springer
14 years 11 months ago
2006
Springer
Computational and comparative analysis of protein-protein interaction (PPI) networks enable understanding of the modular organization of the cell through identification of functio...
RECOMB
2006
Springer
14 years 11 months ago
2006
Springer
RECOMB
2006
Springer
14 years 11 months ago
2006
Springer
Abstract. This paper presents a new method for studying protein folding kinetics. It uses the recently introduced Stochastic Roadmap Simulation (SRS) method to estimate the transit...
RECOMB
2006
Springer
14 years 11 months ago
2006
Springer
RECOMB
2006
Springer
14 years 11 months ago
2006
Springer
Advances in tandem mass-spectrometry (MS/MS) steadily increase the rate of generation of MS/MS spectra and make it more computationally challenging to analyze such huge datasets. A...
RECOMB
2006
Springer
14 years 11 months ago
2006
Springer
Abstract. During evolution, genomes are subject to genome rearrangements that alter the ordering and orientation of genes on the chromosomes. If a genome consists of a single chrom...
RECOMB
2006
Springer
14 years 11 months ago
2006
Springer
We study the problem of enumerating substrings that are common amongst genomes that share evolutionary descent. For example, one might want to enumerate all identical (therefore co...
RECOMB
2006
Springer
14 years 11 months ago
2006
Springer
Abstract. There is a resurgence of interest in RNA secondary structure prediction problem (a.k.a. the RNA folding problem) due to the discovery of many new families of non-coding R...
RECOMB
2006
Springer
14 years 11 months ago
2006
Springer
