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    BMCBI
    2007
    168views more  BMCBI 2007»
    Bayesian model-based inference of transcription factor activity
    14 years 14 days ago
    Bayesian model-based inference of transcription factor activity
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    Background: In many approaches to the inference and modeling of regulatory interactions using microarray data, the expression of the gene coding for the transcription factor is co...
    Simon Rogers, Raya Khanin, Mark Girolami
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    BMCBI
    2007
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    Logical modelling and analysis of the budding yeast cell cycle
    14 years 14 days ago
    Logical modelling and analysis of the budding yeast cell cycle
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    ent> <title> <p>Highlights from the Third International Society for Computational Biology (ISCB) Student Council Symposium at the Fifteenth Annual International Conf...
    Adrien Fauré, Claudine Chaouiya, Andrea Cil...
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    BMCBI
    2007
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    The BioPrompt-box: an ontology-based clustering tool for searching in biological databases
    14 years 14 days ago
    The BioPrompt-box: an ontology-based clustering tool for searching in biological databases
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    Background: High-throughput molecular biology provides new data at an incredible rate, so that the increase in the size of biological databanks is enormous and very rapid. This sc...
    Claudio Corsi, Paolo Ferragina, Roberto Marangoni
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    BMCBI
    2007
    89views more  BMCBI 2007»
    Highlights from the Third International Society for Computational Biology Student Council Symposium at the Fifteenth Annual Inte
    14 years 14 days ago
    Highlights from the Third International Society for Computational Biology Student Council Symposium at the Fifteenth Annual Inte
    Download  www.biomedcentral.com
    In this meeting report we give an overview of the 3rd International Society for Computational Biology Student Council Symposium. Furthermore, we explain the role of the Student Co...
    Nils Gehlenborg, Manuel Corpas, Sarath Chandra Jan...
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    BMCBI
    2007
    58views more  BMCBI 2007»
    Framework for a Protein Ontology
    14 years 14 days ago
    Framework for a Protein Ontology
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    Darren A. Natale, Cecilia N. Arighi, Winona C. Bar...
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    BMCBI
    2007
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    Improved functional prediction of proteins by learning kernel combinations in multilabel settings
    14 years 14 days ago
    Improved functional prediction of proteins by learning kernel combinations in multilabel settings
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    Volker Roth, Bernd Fischer
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    BMCBI
    2007
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    Simultaneous identification of long similar substrings in large sets of sequences
    14 years 14 days ago
    Simultaneous identification of long similar substrings in large sets of sequences
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    Background: Sequence comparison faces new challenges today, with many complete genomes and large libraries of transcripts known. Gene annotation pipelines match these sequences in...
    Jürgen Kleffe, Friedrich Möller, Burghar...
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    BMCBI
    2007
    202views more  BMCBI 2007»
    ProtNet: a tool for stochastic simulations of protein interaction networks dynamics
    14 years 14 days ago
    ProtNet: a tool for stochastic simulations of protein interaction networks dynamics
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    Background: Protein interactions support cell organization and mediate its response to any specific stimulus. Recent technological advances have produced large data-sets that aim ...
    Massimo Bernaschi, Filippo Castiglione, Alessandra...
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    BMCBI
    2007
    168views more  BMCBI 2007»
    Advancing translational research with the Semantic Web
    14 years 14 days ago
    Advancing translational research with the Semantic Web
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    Background: A fundamental goal of the U.S. National Institute of Health (NIH) "Roadmap" is to strengthen Translational Research, defined as the movement of discoveries i...
    Alan Ruttenberg, Tim Clark, William Bug, Matthias ...
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    BMCBI
    2007
    103views more  BMCBI 2007»
    Systems biology approach for mapping the response of human urothelial cells to infection by Enterococcus faecalis
    14 years 14 days ago
    Systems biology approach for mapping the response of human urothelial cells to infection by Enterococcus faecalis
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    Background: To better understand the response of urinary epithelial (urothelial) cells to Enterococcus faecalis, a uropathogen that exhibits resistance to multiple antibiotics, a ...
    Mikhail G. Dozmorov, Kimberly D. Kyker, Ricardo Sa...
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