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    BMCBI
    2007
    99views more  BMCBI 2007»
    Prediction of MHC class II binding affinity using SMM-align, a novel stabilization matrix alignment method
    14 years 14 days ago
    Prediction of MHC class II binding affinity using SMM-align, a novel stabilization matrix alignment method
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    Morten Nielsen, Claus Lundegaard, Ole Lund
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    BMCBI
    2007
    104views more  BMCBI 2007»
    Using contextual and lexical features to restructure and validate the classification of biomedical concepts
    14 years 14 days ago
    Using contextual and lexical features to restructure and validate the classification of biomedical concepts
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    Background: Biomedical ontologies are critical for integration of data from diverse sources and for use by knowledge-based biomedical applications, especially natural language pro...
    Jung-Wei Fan, Hua Xu, Carol Friedman
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    BMCBI
    2007
    159views more  BMCBI 2007»
    Computational genes: a tool for molecular diagnosis and therapy of aberrant mutational phenotype
    14 years 14 days ago
    Computational genes: a tool for molecular diagnosis and therapy of aberrant mutational phenotype
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    Background: A finite state machine manipulating information-carrying DNA strands can be used to perform autonomous molecular-scale computations at the cellular level. Results: We ...
    Israel Mark Martínez-Pérez, Gong Zha...
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    BMCBI
    2007
    79views more  BMCBI 2007»
    Simcluster: clustering enumeration gene expression data on the simplex space
    14 years 14 days ago
    Simcluster: clustering enumeration gene expression data on the simplex space
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    Ricardo Z. N. Vêncio, Leonardo Varuzza, Carl...
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    BMCBI
    2007
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    A meta-data based method for DNA microarray imputation
    14 years 14 days ago
    A meta-data based method for DNA microarray imputation
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    Background: DNA microarray experiments are conducted in logical sets, such as time course profiling after a treatment is applied to the samples, or comparisons of the samples unde...
    Rebecka Jörnsten, Ming Ouyang, Hui-Yu Wang
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    BMCBI
    2007
    113views more  BMCBI 2007»
    Analysis and prediction of antibacterial peptides
    14 years 14 days ago
    Analysis and prediction of antibacterial peptides
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    Background: Antibacterial peptides are important components of the innate immune system, used by the host to protect itself from different types of pathogenic bacteria. Over the l...
    Sneh Lata, B. K. Sharma, G. P. S. Raghava
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    BMCBI
    2007
    142views more  BMCBI 2007»
    Predicting and improving the protein sequence alignment quality by support vector regression
    14 years 14 days ago
    Predicting and improving the protein sequence alignment quality by support vector regression
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    Background: For successful protein structure prediction by comparative modeling, in addition to identifying a good template protein with known structure, obtaining an accurate seq...
    Minho Lee, Chan-seok Jeong, Dongsup Kim
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    BMCBI
    2007
    144views more  BMCBI 2007»
    Spectral estimation in unevenly sampled space of periodically expressed microarray time series data
    14 years 14 days ago
    Spectral estimation in unevenly sampled space of periodically expressed microarray time series data
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    Background: Periodogram analysis of time-series is widespread in biology. A new challenge for analyzing the microarray time series data is to identify genes that are periodically ...
    Alan Wee-Chung Liew, Jun Xian, Shuanhu Wu, David K...
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    BMCBI
    2007
    137views more  BMCBI 2007»
    PlnTFDB: an integrative plant transcription factor database
    14 years 14 days ago
    PlnTFDB: an integrative plant transcription factor database
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    Background: Transcription factors (TFs) are key regulatory proteins that enhance or repress the transcriptional rate of their target genes by binding to specific promoter regions ...
    Diego Mauricio Riaño-Pachón, Sloboda...
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    BMCBI
    2007
    173views more  BMCBI 2007»
    CGKB: an annotation knowledge base for cowpea (Vigna unguiculata L.) methylation filtered genomic genespace sequences
    14 years 14 days ago
    CGKB: an annotation knowledge base for cowpea (Vigna unguiculata L.) methylation filtered genomic genespace sequences
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    Background: Cowpea [Vigna unguiculata (L.) Walp.] is one of the most important food and forage legumes in the semiarid tropics because of its ability to tolerate drought and grow ...
    Xianfeng Chen, Thomas W. Laudeman, Paul J. Rushton...
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