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    BMCBI
    2008
    70views more  BMCBI 2008»
    The MoVIN server for the analysis of protein interaction networks
    13 years 11 months ago
    The MoVIN server for the analysis of protein interaction networks
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    Paolo Marcatili, Giovanni Bussotti, Anna Tramontan...
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    BMCBI
    2008
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    RDFScape: Semantic Web meets Systems Biology
    13 years 11 months ago
    RDFScape: Semantic Web meets Systems Biology
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    Andrea Splendiani
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    BMCBI
    2008
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    Exploiting likely-positive and unlabeled data to improve the identification of protein-protein interaction articles
    13 years 11 months ago
    Exploiting likely-positive and unlabeled data to improve the identification of protein-protein interaction articles
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    Richard Tzong-Han Tsai, Hsi-Chuan Hung, Hong-Jie D...
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    BMCBI
    2008
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    Transmembrane helix prediction using amino acid property features and latent semantic analysis
    13 years 11 months ago
    Transmembrane helix prediction using amino acid property features and latent semantic analysis
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    Background: Prediction of transmembrane (TM) helices by statistical methods suffers from lack of sufficient training data. Current best methods use hundreds or even thousands of f...
    Madhavi Ganapathiraju, Narayanas Balakrishnan, Raj...
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    BMCBI
    2008
    156views more  BMCBI 2008»
    ArrayWiki: an enabling technology for sharing public microarray data repositories and meta-analyses
    13 years 11 months ago
    ArrayWiki: an enabling technology for sharing public microarray data repositories and meta-analyses
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    Background: A survey of microarray databases reveals that most of the repository contents and data models are heterogeneous (i.e., data obtained from different chip manufacturers)...
    Todd H. Stokes, J. T. Torrance, Henry Li, May D. W...
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    BMCBI
    2008
    226views more  BMCBI 2008»
    ProteoLens: a visual analytic tool for multi-scale database-driven biological network data mining
    13 years 11 months ago
    ProteoLens: a visual analytic tool for multi-scale database-driven biological network data mining
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    Background: New systems biology studies require researchers to understand how interplay among myriads of biomolecular entities is orchestrated in order to achieve high-level cellu...
    Tianxiao Huan, Andrey Y. Sivachenko, Scott H. Harr...
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    BMCBI
    2008
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    Functional module detection by functional flow pattern mining in protein interaction networks
    13 years 11 months ago
    Functional module detection by functional flow pattern mining in protein interaction networks
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    eraction networks. In this abstract, we extend this approach by mining functional flow patterns for the purpose of detecting small-sized modules for specific functions. Methods Our...
    Young-Rae Cho, Lei Shi, Aidong Zhang
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    BMCBI
    2008
    106views more  BMCBI 2008»
    An Integrated Korean Biodiversity and Genetic Information Retrieval System
    13 years 11 months ago
    An Integrated Korean Biodiversity and Genetic Information Retrieval System
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    Background: On-line biodiversity information databases are growing quickly and being integrated into general bioinformatics systems due to the advances of fast gene sequencing tec...
    Jeongheui Lim, Jong Bhak, Hee-Mock Oh, Chang-Bae K...
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    BMCBI
    2008
    135views more  BMCBI 2008»
    Functional site prediction selects correct protein models
    13 years 11 months ago
    Functional site prediction selects correct protein models
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    Background: The prediction of protein structure can be facilitated by the use of constraints based on a knowledge of functional sites. Without this information it is still possibl...
    Vijayalakshmi Chelliah, William R. Taylor
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    BMCBI
    2008
    78views more  BMCBI 2008»
    Exploiting and integrating rich features for biological literature classification
    13 years 11 months ago
    Exploiting and integrating rich features for biological literature classification
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    Hongning Wang, Minlie Huang, Shilin Ding, Xiaoyan ...
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