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HPCA
2006
IEEE
14 years 9 months ago
DMA-aware memory energy management
As increasingly larger memories are used to bridge the widening gap between processor and disk speeds, main memory energy consumption is becoming increasingly dominant. Even thoug...
Vivek Pandey, Weihang Jiang, Yuanyuan Zhou, Ricard...
HPCA
2003
IEEE
14 years 9 months ago
TCP: Tag Correlating Prefetchers
Although caches for decades have been the backbone of the memory system, the speed gap between CPU and main memory suggests their augmentation with prefetching mechanisms. Recentl...
Zhigang Hu, Margaret Martonosi, Stefanos Kaxiras
RECOMB
2006
Springer
14 years 9 months ago
A New Approach to Protein Identification
Advances in tandem mass-spectrometry (MS/MS) steadily increase the rate of generation of MS/MS spectra and make it more computationally challenging to analyze such huge datasets. A...
Nuno Bandeira, Dekel Tsur, Ari Frank, Pavel A. Pev...
RECOMB
2006
Springer
14 years 9 months ago
A Study of Accessible Motifs and RNA Folding Complexity
mRNA molecules are folded in the cells and therefore many of their substrings may actually be inaccessible to protein and microRNA binding. The need to apply an accessability crite...
Ydo Wexler, Chaya Ben-Zaken Zilberstein, Michal Zi...
RECOMB
2005
Springer
14 years 9 months ago
RNA-RNA Interaction Prediction and Antisense RNA Target Search
Abstract. Recent studies demonstrating the existence of special non-coding "antisense" RNAs used in post-transcriptional gene regulation have received considerable attent...
Can Alkan, Emre Karakoç, Joseph H. Nadeau, ...