BIBE
2005
IEEE
14 years 5 months ago
2005
IEEE
We propose a method for finding seeds for the local alignment of two nucleotide sequences. Our method uses randomized algorithms to find approximate seeds. We present a dynamic ...
BIBE
2005
IEEE
14 years 5 months ago
2005
IEEE
BIBE
2005
IEEE
14 years 5 months ago
2005
IEEE
BIBE
2005
IEEE
14 years 5 months ago
2005
IEEE
In this article we present novel preprocessing techniques, based on topological measures of the network, to identify clusters of proteins from Protein-protein interaction (PPI) ne...
BIBE
2005
IEEE
14 years 5 months ago
2005
IEEE
We introduce a new ensemble method based on decision tree to discover significant and diversified rules for subtype classification of childhood acute lymphoblastic leukemia, a ...
BIBE
2005
IEEE
14 years 5 months ago
2005
IEEE
PSI-BLAST remains one of the popular tools for searching remote homologs in sequence databases. We recently demonstrated that hybrid alignment can function as the alignment core f...
BIBE
2005
IEEE
14 years 5 months ago
2005
IEEE
Selecting informative genes from microarray experiments is one of the most important data analysis steps for deciphering biological information imbedded in such experiments. Howev...
BIBE
2005
IEEE
14 years 5 months ago
2005
IEEE
Human Papilloma Virus (HPV) is a sexually transmitted virus, which can lead to cervical cancer. HPV DNA is found in cervical cancers with types 16, 18, 31 and 45 accounting for mo...
BIBE
2005
IEEE
14 years 5 months ago
2005
IEEE
We propose two novel dynamic programming (DP) methods that solve the the approximate bounded and unbounded global alignment problems for biological sequences. Our first method so...
BIBE
2005
IEEE
14 years 5 months ago
2005
IEEE
In this paper, we propose a Distance-based Sequence Indexing Method (DSIM) for indexing and searching genome databases. Borrowing the idea of video compression, we compress the ge...