Sciweavers

CSB
2005
IEEE
146views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Multi-Metric and Multi-Substructure Biclustering Analysis for Gene Expression Data
A good number of biclustering algorithms have been proposed for grouping gene expression data. Many of them have adopted matrix norms to define the similarity score of a bicluste...
Sun-Yuan Kung, Man-Wai Mak, Ilias Tagkopoulos
CSB
2005
IEEE
180views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Functional Modularity in a Large-Scale Mammalian Molecular Interaction Network
The Ingenuity™ Pathways Knowledge Base (IPKB) contains over one million findings manually curated from the scientific literature. Highly-structured content from the IPKB forms...
Andreas Kramer, Daniel R. Richards, James O. Bowlb...
CSB
2005
IEEE
129views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Consensus Methods Using Phylogenetic Databases
Andreas Kramer, Daniel R. Richards, James O. Bowlb...
CSB
2005
IEEE
167views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Considerations in Making Microarray Cross-Platform Correlations
Comparison and integration of expression data derived from diverse microarray platforms is challenging. Factors affecting cross-platform comparison of microarray data include the ...
Manohar Kollegal, Sudeshna Adak, Richard Shippy, T...
CSB
2005
IEEE
166views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Artificial Neural Networks to Predict Daylily Hybrids
Artificial Neural Networks (ANN) were employed to predict daylily (Hemerocalli spp.) hybrids from known characteristics of parents used in hybridization. Features such as height, ...
Ramana M. Gosukonda, Masoud Naghedolfeizi, Johnny ...
CSB
2005
IEEE
192views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Operon Prediction in Cyanobacteria using Comparative Genomics
In this work, we performed a comprehensive analysis of the genome organization of eight publicly available cyanobacterial genomes and of the extensively studied Escherichia coli K...
Natalia Khuri, Nikhila S. Rao
CSB
2005
IEEE
192views Bioinformatics» more  CSB 2005»
14 years 5 months ago
RNAMute: RNA Secondary Structure Mutation Analysis Tool
RNAMute is an interactive web tool written in Java that calculates the secondary structure of all single point mutations, given an RNA sequence, and organizes them into categories...
Alexander Churkin, Ornit Elgad, Oshrat Petgho, Dan...
CSB
2005
IEEE
129views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Reducing Gene Regulatory Networks by Decomposition
Luonan Chen, Ruiqi Wang, Kazuyuki Aihara
CSB
2005
IEEE
115views Bioinformatics» more  CSB 2005»
14 years 5 months ago
A New Clustering Strategy with Stochastic Merging and Removing Based on Kernel Functions
With hierarchical clustering methods, divisions or fusions, once made, are irrevocable. As a result, when two elements in a bottom-up algorithm are assigned to one cluster, they c...
Huimin Geng, Hesham H. Ali