Sciweavers

ISMB
1997
14 years 25 days ago
Hierarchical Protein Structure Superposition Using Both Secondary Structure and Atomic Representations
The structural comparison of proteins has become increasingly important as a means to identify protein motifs and fold families. In this paper we present a new algorithm for the c...
Amit Pal Singh, Douglas L. Brutlag
ISMB
1997
14 years 25 days ago
ANOLEA: A WWW Server to Assess Protein Structures
ANOLEA (Atomic Non-Local Environment Assessment) is a www server that performs energy calculations at the atomic level in protein structures. The calculations involve the non-loca...
Francisco Melo, Damien Devos, Eric Depiereux, Erne...
ISMB
1997
14 years 25 days ago
Selecting Optimal Oligonucleotide Primers for Multiplex PCR
Weinvestigate the problemof designingefficient multiplex PCRfor medical applications. Weshowthat the problemis NP-completeby transformation to the Multiple Choice Matchingproblema...
Pierre Nicodème, Jean-Marc Steyaert
ISMB
1997
14 years 25 days ago
Enumerating and Ranking Discrete Motifs
Discrete motifsthat discriminate functionalclasses of proteins are useful for classifying newsequences, capturingstructural constraints, andidentifyingprotein subclasses.Despiteth...
Craig G. Nevill-Manning, Komal S. Sethi, Thomas D....
ISMB
1997
14 years 25 days ago
A Fast Heuristic Algorithm for a Probe Mapping Problem
Anewheuristic algorithm is presented for mapping probes to locations along the genome,given noisy pairwise distance data as input. Themodel consideredis quite general: Theinput co...
Brendan Mumey