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    ISMB
    1998
    101views Computational Biology» more  ISMB 1998»
    The LabFlow System for Workflow Management in Large Scale Biology Research Laboratories
    14 years 26 days ago
    The LabFlow System for Workflow Management in Large Scale Biology Research Laboratories
    Download  www.aaai.org
    LabFlowis a workflowmanagementsystem designed for large scale biologyresearch laboratories. It providesa workflowmodelin whichobjects flowfromtask to task under programmaticcontro...
    Nathan Goodman, Steve Rozen, Lincoln Stein
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    ISMB
    1998
    148views Computational Biology» more  ISMB 1998»
    BioSim: A New Qualitative Simulation Environment for Molecular Biology
    14 years 26 days ago
    BioSim: A New Qualitative Simulation Environment for Molecular Biology
    Download  www.aaai.org
    Traditionally, biochemical systems are modelled usingkinetics anddifferential equationsin a quantitative simulator. However,for manybiological processes detailed quantitative info...
    Karsten R. Heidtke, Steffen Schulze-Kremer
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    ISMB
    1998
    98views Computational Biology» more  ISMB 1998»
    A Statistical Theory of Sequence Alignment with Gaps
    14 years 26 days ago
    A Statistical Theory of Sequence Alignment with Gaps
    Download  www.aaai.org
    Astatistical theory of local alignmentalgorithms with gaps is presented. Both the linear and logarithmic phases, as well as the phase transition separating the two phases, are des...
    Dirk Drasdo, Terence Hwa, Michael Lässig
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    ISMB
    1998
    156views Computational Biology» more  ISMB 1998»
    Advanced Query Mechanisms for Biological Databases
    14 years 26 days ago
    Advanced Query Mechanisms for Biological Databases
    Download  www.anthonykosky.com
    Existing query interfaces for biological databases are either based on fixed forms or textual query languages. Users of a fixed form-based query interface are limited to performin...
    I-Min A. Chen, Anthony Kosky, Victor M. Markowitz,...
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    ISMB
    1998
    98views Computational Biology» more  ISMB 1998»
    Computational Applications of DNA Structural Scales
    14 years 26 days ago
    Computational Applications of DNA Structural Scales
    Download  www.aaai.org
    We study from a computational standpoint several different physicalscales associatedwith structural features of DNA sequences, including dinucleotide scales such as base stacking ...
    Pierre Baldi, Søren Brunak, Yves Chauvin, A...
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    ISMB
    1998
    82views Computational Biology» more  ISMB 1998»
    TAMBIS: Transparent Access to Multiple Bioinformatics Information Sources
    14 years 26 days ago
    TAMBIS: Transparent Access to Multiple Bioinformatics Information Sources
    Download  www.cs.man.ac.uk
    Patricia G. Baker, Andy Brass, Sean Bechhofer, Car...
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    ISMB
    1998
    94views Computational Biology» more  ISMB 1998»
    Calculating the Exact Probability of Language-Like Patterns in Biomolecular Sequences
    14 years 26 days ago
    Calculating the Exact Probability of Language-Like Patterns in Biomolecular Sequences
    Download  www.aaai.org
    Kevin Atteson
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    ISMB
    1998
    130views Computational Biology» more  ISMB 1998»
    Compression of Strings with Approximate Repeats
    14 years 26 days ago
    Compression of Strings with Approximate Repeats
    Download  www.csse.monash.edu.au
    We describe a model for strings of characters that is loosely based on the Lempel Ziv model with the addition that a repeated substring can be an approximate match to the original...
    Lloyd Allison, Timothy Edgoose, Trevor I. Dix
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    ISMB
    2003
    73views Computational Biology» more  ISMB 2003»
    Evaluation of text data mining for database curation: lessons learned from the KDD Challenge Cup
    14 years 26 days ago
    Evaluation of text data mining for database curation: lessons learned from the KDD Challenge Cup
    Download  www.mitre.org
    Alexander S. Yeh, Lynette Hirschman, Alexander A. ...
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    ISMB
    2003
    67views Computational Biology» more  ISMB 2003»
    Scaling up accurate phylogenetic reconstruction from gene-order data
    14 years 26 days ago
    Scaling up accurate phylogenetic reconstruction from gene-order data
    Download  lcbb.epfl.ch
    Jijun Tang, Bernard M. E. Moret
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