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    BMCBI
    2005
    80views more  BMCBI 2005»
    Gene finding in the chicken genome
    13 years 11 months ago
    Gene finding in the chicken genome
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    Background: Despite the continuous production of genome sequence for a number of organisms, reliable, comprehensive, and cost effective gene prediction remains problematic. This i...
    Eduardo Eyras, Alexandre Reymond, Robert Castelo, ...
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    BMCBI
    2005
    133views more  BMCBI 2005»
    Systematic determination of the mosaic structure of bacterial genomes: species backbone versus strain-specific loops
    13 years 11 months ago
    Systematic determination of the mosaic structure of bacterial genomes: species backbone versus strain-specific loops
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    Background: Public databases now contain multitude of complete bacterial genomes, including several genomes of the same species. The available data offers new opportunities to add...
    Hélène Chiapello, I. Bourgait, F. So...
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    BMCBI
    2005
    173views more  BMCBI 2005»
    Phydbac "Gene Function Predictor" : a gene annotation tool based on genomic context analysis
    13 years 11 months ago
    Phydbac "Gene Function Predictor" : a gene annotation tool based on genomic context analysis
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    Background: The large amount of completely sequenced genomes allows genomic context analysis to predict reliable functional associations between prokaryotic proteins. Major method...
    François Enault, Karsten Suhre, Jean-Michel...
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    BMCBI
    2005
    302views more  BMCBI 2005»
    CGHPRO - A comprehensive data analysis tool for array CGH
    13 years 11 months ago
    CGHPRO - A comprehensive data analysis tool for array CGH
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    Background: Array CGH (Comparative Genomic Hybridisation) is a molecular cytogenetic technique for the genome wide detection of chromosomal imbalances. It is based on the cohybrid...
    Wei Chen, Fikret Erdogan, H.-Hilger Ropers, Steffe...
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    BMCBI
    2005
    253views more  BMCBI 2005»
    The Use of Edge-Betweenness Clustering to Investigate Biological Function in Protein Interaction Networks
    13 years 11 months ago
    The Use of Edge-Betweenness Clustering to Investigate Biological Function in Protein Interaction Networks
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    Background: This paper describes an automated method for finding clusters of interconnected proteins in protein interaction networks and retrieving protein annotations associated ...
    Ruth Dunn, Frank Dudbridge, Christopher M. Sanders...
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    BMCBI
    2005
    52views more  BMCBI 2005»
    Identification of significant periodic genes in microarray gene expression data
    13 years 11 months ago
    Identification of significant periodic genes in microarray gene expression data
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    Jie Chen
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    BMCBI
    2005
    77views more  BMCBI 2005»
    Ontological visualization of protein-protein interactions
    13 years 11 months ago
    Ontological visualization of protein-protein interactions
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    Background: Cellular processes require the interaction of many proteins across several cellular compartments. Determining the collective network of such interactions is an importa...
    Harold J. Drabkin, Christopher Hollenbeck, David P...
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    BMCBI
    2005
    189views more  BMCBI 2005»
    Quantitative inference of dynamic regulatory pathways via microarray data
    13 years 11 months ago
    Quantitative inference of dynamic regulatory pathways via microarray data
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    Background: The cellular signaling pathway (network) is one of the main topics of organismic investigations. The intracellular interactions between genes in a signaling pathway ar...
    Wen-Chieh Chang, Chang-Wei Li, Bor-Sen Chen
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    BMCBI
    2005
    73views more  BMCBI 2005»
    Using hexamers to predict cis-regulatory motifs in Drosophila
    13 years 11 months ago
    Using hexamers to predict cis-regulatory motifs in Drosophila
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    Bob Y. Chan, Dennis F. Kibler
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    BMCBI
    2005
    80views more  BMCBI 2005»
    htSNPer1.0: software for haplotype block partition and htSNPs selection
    13 years 11 months ago
    htSNPer1.0: software for haplotype block partition and htSNPs selection
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    Keyue Ding, Jing Zhang, Kaixin Zhou, Yan Shen, Xue...
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